Pairwise Alignments

Query, 406 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 654 a.a., pyoverdine efflux carrier and ATP binding protein from Pseudomonas putida KT2440

 Score =  145 bits (365), Expect = 4e-39
 Identities = 118/408 (28%), Positives = 192/408 (47%), Gaps = 27/408 (6%)

Query: 5   GIILKSLAA-------HRTRALLAMLGVFLGALALTAVMHVAGAMVLKADLETQKLGPNL 57
           G +L+SL A       +R R  L +LG+ +G  ++  ++ V      +   +    G N+
Sbjct: 261 GELLESLQAAWRVMWINRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMAAFGSNI 320

Query: 58  LQALSGQVRFRRDGPSGVSGVNRTFTLQDAEAILGGVAQVRDGVPYCNAPMPVRYGSIKT 117
           L  L+G     R+ P+G        TL D  AI G + QV+  +P     M VR+G+   
Sbjct: 321 LY-LNGSPPTLRE-PAG------RITLDDVAAI-GELPQVKHIMPVLGEKMMVRHGNNSQ 371

Query: 118 TSQLVATLPGFARVRAYSPAYGRFISDEDEAGRALVCVLGTAIATRLFERPDNAVGRTVF 177
              +      F  +  +    G F ++ DEA  A V V+G  +  ++     N +G+ + 
Sbjct: 372 QFYVGGNNTFFPEIFNWPAVEGSFFTETDEASSAAVAVIGQKVREKMLAPGSNPIGQYLL 431

Query: 178 FFRAPVQVVGVMEEKGQDVSGTNLDEQVYVPLSTYMRRMANQDWISGVYMNLHDGADEEA 237
               P QVVG++  KG      + D ++ VP S    R+        + +   D    + 
Sbjct: 432 IGNVPFQVVGILAGKGASSGDQDSDGRIVVPFSAAAIRLFGHRDPDYIAIAARDSGQVKD 491

Query: 238 ARAAVTAILRSRHLIAAGQKDDFSVLSARDANKLRKEAL---DLVQTLGVLSSSISFAVG 294
             AA+  +LR RH      K DF + +  DA  ++ EA     L   LG +++ IS  VG
Sbjct: 492 TEAAIDRLLRQRHQ----GKHDFELTN--DAALIQAEARTQNSLSLMLGAIAA-ISLLVG 544

Query: 295 SLGILSIMTLLVRARRLEIGVRRAVGASRNVIVRQFLAEAGLMAGVGGTLGVVVALALVT 354
            +G+++IM + VR R  EIG+R A GA +  I+RQFL+EA +++ VGG  G+ +AL +V 
Sbjct: 545 GIGVMNIMLMTVRERTREIGIRMATGARQRDILRQFLSEAIMLSMVGGLTGIALAL-VVG 603

Query: 355 VVYAVGDFPYTYDPLLAAGACIASVVLGVAAGAYPAWQASRVDVLDVL 402
               + D    +      GA   +V+ GV  G  PA +A+R+D +  L
Sbjct: 604 ASLTLADIAVAFALPAIVGAFACAVITGVVFGFMPARKAARLDPVKAL 651