Pairwise Alignments

Query, 406 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 648 a.a., Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  146 bits (369), Expect = 2e-39
 Identities = 111/394 (28%), Positives = 180/394 (45%), Gaps = 13/394 (3%)

Query: 10  SLAAHRTRALLAMLGVFLGALALTAVMHVAGAMVLKADLETQKLGPNLLQALSGQVRFRR 69
           ++AA++ R LL MLG+ +G  ++ +++ V  A       + + +G N +    G+  F  
Sbjct: 264 AMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTNTIDIHPGK-DFGD 322

Query: 70  DGPSGVSGVNRTFTLQDAEAILGGVAQVRDGVPYCNAPMPVRYGSIKTTSQLVATLPGFA 129
           D P       R     D    +     V    P  +  + +RYG+I            + 
Sbjct: 323 DNPQ-----YRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNANGVSGDYF 377

Query: 130 RVRAYSPAYGRFISDEDEAGRALVCVLGTAIATRLFERPDNAVGRTVFFFRAPVQVVGVM 189
            V   S   G   +   +  RA V VL      +LF    N VG  V     PV V+GV 
Sbjct: 378 NVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQLFPNKANVVGEVVLAGNMPVIVIGVA 437

Query: 190 EEKGQDVSGTNLDEQVYVPLSTYMRRMANQDWISGVYMNLHDGADEEAARAAVTAILRSR 249
           EEK      +NL  QV++P ST   R+  Q W++ + + + DG D + A   +T +L  R
Sbjct: 438 EEKPSMYGNSNL-LQVWLPYSTMSDRIMGQSWLNSITVRVKDGVDSDQAEQQLTRLLTLR 496

Query: 250 HLIAAGQKDDFSVLSARDANKLRKEALDLVQTLGVLSSSISFAVGSLGILSIMTLLVRAR 309
           H      K DF   +     K  ++    +Q    L + IS  VG +G+++IM + V  R
Sbjct: 497 H-----GKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGIGVMNIMLVSVTER 551

Query: 310 RLEIGVRRAVGASRNVIVRQFLAEAGLMAGVGGTLGVVVALALVTVVYA-VGDFPYTYDP 368
             EIG+R AVGA  + +++QFL EA L+  VGG LG+ +++ +  ++   +  +   +  
Sbjct: 552 TREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFMLQLFLPGWEIGFSL 611

Query: 369 LLAAGACIASVVLGVAAGAYPAWQASRVDVLDVL 402
              A A + S   G+  G  PA  A+R+D +D L
Sbjct: 612 TALASAFLCSTFTGILFGWLPARNAARLDPVDAL 645