Pairwise Alignments

Query, 406 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 648 a.a., macrolide ABC transporter peremase/ATPase from Escherichia coli BL21

 Score =  151 bits (381), Expect = 6e-41
 Identities = 111/395 (28%), Positives = 188/395 (47%), Gaps = 13/395 (3%)

Query: 9   KSLAAHRTRALLAMLGVFLGALALTAVMHVAGAMVLKADLETQKLGPNLLQALSGQVRFR 68
           ++LAA++ R LL MLG+ +G  ++ +++ V  A       + + +G N +    G+  F 
Sbjct: 263 RALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGK-DFG 321

Query: 69  RDGPSGVSGVNRTFTLQDAEAILGGVAQVRDGVPYCNAPMPVRYGSIKTTSQLVATLPGF 128
            D P       +     D  AI      V    P  +  + +RY ++   +        +
Sbjct: 322 DDDPQ----YQQALKYDDLIAIQKQ-PWVASATPAVSQNLRLRYNNVDVAASANGVSGDY 376

Query: 129 ARVRAYSPAYGRFISDEDEAGRALVCVLGTAIATRLFERPDNAVGRTVFFFRAPVQVVGV 188
             V   + + G   + E   GRA V VL +    +LF    + VG  +     P +V+GV
Sbjct: 377 FNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGV 436

Query: 189 MEEKGQDVSGTNLDEQVYVPLSTYMRRMANQDWISGVYMNLHDGADEEAARAAVTAILRS 248
            EEK Q + G++   +V++P ST   R+  Q W++ + + + +G D   A   +T +L  
Sbjct: 437 AEEK-QSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSL 495

Query: 249 RHLIAAGQKDDFSVLSARDANKLRKEALDLVQTLGVLSSSISFAVGSLGILSIMTLLVRA 308
           RH      K DF   +     K  ++    +Q    L + IS  VG +G+++IM + V  
Sbjct: 496 RH-----GKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTE 550

Query: 309 RRLEIGVRRAVGASRNVIVRQFLAEAGLMAGVGGTLGVVVALALV-TVVYAVGDFPYTYD 367
           R  EIG+R AVGA  + +++QFL EA L+  VGG LG+ ++L +  T+   +  +   + 
Sbjct: 551 RTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFS 610

Query: 368 PLLAAGACIASVVLGVAAGAYPAWQASRVDVLDVL 402
           PL    A + S V G+  G  PA  A+R+D +D L
Sbjct: 611 PLALLLAFLCSTVTGILFGWLPARNAARLDPVDAL 645