Pairwise Alignments

Query, 406 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 648 a.a., ABC transporter nucleotide binding/ATPase from Agrobacterium fabrum C58

 Score =  152 bits (383), Expect = 4e-41
 Identities = 120/397 (30%), Positives = 193/397 (48%), Gaps = 25/397 (6%)

Query: 13  AHRTRALLAMLGVFLGALALTAVMHVAGAMVLKADLETQKLGPNLLQALSGQVRFRRDGP 72
           AH+ R+LL MLG+ +G  ++ A+  +      +       LG N ++  +G+     +  
Sbjct: 267 AHKMRSLLTMLGIIIGIASVAAISALGAGSQQQILSSISSLGTNTIEVRAGKGFGDLE-- 324

Query: 73  SGVSGVNRTFTLQDAEAILGGVAQVRDGVPYCNAPMPVRYGSIKTTSQLVATLPGFARVR 132
              +G  RT    DAEA++     V    P     + V+  ++   + +      F RVR
Sbjct: 325 ---AGKIRTLVPADAEALVNQ-PYVDSVTPTVTTSVTVKRAAVAVNASVTGVGADFFRVR 380

Query: 133 AYSPAYGRFISDEDEAGRALVCVLGTAIATRLFERPDNAVGRTVFFFRAPVQVVGVMEEK 192
               A+G+    +D    +   V+  + A  LF    N VG+ +     P +VVGV   K
Sbjct: 381 GLELAHGQLFDAQDVIAYSQNVVIDASAARDLFPDRVNPVGQVILLGTMPARVVGVT--K 438

Query: 193 GQDVSGTNLDE-QVYVPLSTYMRRMANQDWISGVYMNLHDGADEEAARAAVTAILRSRHL 251
            ++  G  +D   VY P +T M RM  +  + G+ + + D  D     AAVT ++  RH 
Sbjct: 439 RENSFGPAVDTLTVYAPYTTVMGRMLGRPNVDGITVRIRDDVDPGNVEAAVTRLIERRH- 497

Query: 252 IAAGQKDDFSVLSARDANKLRKEALDLVQTLGVLSSS---ISFAVGSLGILSIMTLLVRA 308
              G KD F   SA     +R+      QTL +L SS   IS  VG +G+++IM + V  
Sbjct: 498 ---GAKDFFLTNSAT----IRETIETTTQTLTLLISSVAVISLIVGGIGVMNIMLVSVTE 550

Query: 309 RRLEIGVRRAVGASRNVIVRQFLAEAGLMAGVGGTLGVVVALALVTVVYAVG-DFPYTYD 367
           R  EIGVR AVGA R+ I+ QFL EA ++  VGG +G+++AL +  +   +  DF   + 
Sbjct: 551 RTKEIGVRVAVGARRSDILSQFLIEAVMVCLVGGLMGIMLALGISALFNLLSPDFKMIFS 610

Query: 368 P--LLAAGACIASVVLGVAAGAYPAWQASRVDVLDVL 402
           P  ++ A AC  S ++G+  G  PA  A+++D ++ L
Sbjct: 611 PGSIIVAFAC--STLIGIVFGFLPARNAAKLDPIEAL 645