Pairwise Alignments

Query, 418 a.a., sensor histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 796 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  128 bits (322), Expect = 5e-34
 Identities = 104/311 (33%), Positives = 149/311 (47%), Gaps = 48/311 (15%)

Query: 119 RINGRKFQFEMVASPIKDPATHDRQI---LIFKRDVTLQKEFQAKFHQAEKMATVGMLAA 175
           R+ GR+    ++A     P+  D  I   +I   D T Q+  + +F Q++KM  +G LA 
Sbjct: 372 RLKGRR---NLIAQLFVSPSHEDGDISGLVIHFIDATEQRNLEMQFAQSQKMQAMGQLAG 428

Query: 176 GVAHEVNNPLTAINGFAEGILRRVKRLRGSVDPDLHADLTDYAGTILGECRRCQEIVHSL 235
           GVAH+ NN LTA+ GF + +L+R     G+ DP   AD+      +     R   +V  L
Sbjct: 429 GVAHDFNNLLTAMIGFCDLLLQR----HGAGDPSF-ADIMQ----VKQNANRAASLVRQL 479

Query: 236 LTFSRPHSSAFSPVNLNVVVDDTLKLLHNHLKQPKYRHVRIDTRLCPTAPVILGCEAQLK 295
           L FSR    A  P  LNV   D L  L N L++     + +         ++     Q  
Sbjct: 480 LAFSR--RQALQPRLLNVT--DALAELSNLLRRLLGETIELRMIHGRALGLVRVDPGQFD 535

Query: 296 QVMLNLLVNALDALEAVAPSAGDSGDDAPPDAHGGKTAVITVAPFRDER----------- 344
           QV++NL VNA DA+                   GG   + T A   D+            
Sbjct: 536 QVIINLAVNARDAMPG-----------------GGALTIRTNAVHVDQPIQRGPELMPAG 578

Query: 345 -HAGFTVRDTGSGIPQEHLHSLFEPFFTTKPVGRGIGIGLSTCYTIVTEHGGDISVESKE 403
            +    V DTG+GI +E+L  +FEPFF+TK VG G G+GLST Y IV +  G I VES+ 
Sbjct: 579 DYVQIEVADTGTGIGKENLARIFEPFFSTKEVGAGTGLGLSTVYGIVRQTDGFIFVESEP 638

Query: 404 GEGSVFTVTLP 414
           G+G+ F++ LP
Sbjct: 639 GQGATFSIYLP 649