Pairwise Alignments

Query, 242 a.a., conserved hypothetical protein TIGR00257 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 194 a.a., putative ribosome-binding factor from Pseudomonas putida KT2440

 Score =  101 bits (251), Expect = 1e-26
 Identities = 65/187 (34%), Positives = 97/187 (51%), Gaps = 12/187 (6%)

Query: 20  ETIRRSRFIVTLAHAPDTASAHAFVQAIRREHPDATHNCWAFAAGAPGATARVGFSDDGE 79
           E IR+SRFI         A A +F++  R     ATHNCWA+  GA   +     SDDGE
Sbjct: 13  EEIRKSRFITLAGPISSAAEAMSFIE--RHSDLAATHNCWAWKLGAQYRS-----SDDGE 65

Query: 80  PHGTAGRPMLTMLLHGGVGEVAAVVTRYFGGVKLGTGGLVRAYQGLVRIGLDTLPRRERI 139
           P GTAGRP+L  +      +V  +V R++GG++LGTGGL RAY G     L   P+R  +
Sbjct: 66  PGGTAGRPILAAIEAQDCDQVVVLVIRWYGGIQLGTGGLARAYGGGANKCLQQAPKRLLV 125

Query: 140 IPVRVEVVIDYTQVTLFQRLLPTFEAVTVAERF---GVDAVFEVSLPHERLAMFEAALVE 196
                     ++++ L +  L   + + + E+F   GVD V  ++L    LA  +  L +
Sbjct: 126 QRSHFSCSCSFSELALVKLRLAEVDGLVLDEQFTANGVDLV--IALGDAHLAPLQQQLAD 183

Query: 197 MTGGAVL 203
           ++ G +L
Sbjct: 184 LSRGRIL 190