Pairwise Alignments

Query, 204 a.a., ribosomal RNA large subunit methyltransferase J (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 225 a.a., Heat shock protein FtsJ/RrmJ @ Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  111 bits (278), Expect = 9e-30
 Identities = 73/202 (36%), Positives = 108/202 (53%), Gaps = 14/202 (6%)

Query: 6   DHYFLKAKQENYPARSVYKLKEIDNRFKIFRQGMKVLDLGAAPGSWSLGAAEKVGPRGR- 64
           D Y   A+++ Y AR+ YKL+EID    + R G  V+DLG+ PG+WS     ++ P G  
Sbjct: 23  DPYVRLAQKDGYRARAAYKLQEIDETLGLVRPGQAVVDLGSTPGAWSQYLRRRLSPNGAA 82

Query: 65  -------VLACDLQETDTVFPDNVTFMQENVFER---SEAFENLLDE-IAPFDVVISDMA 113
                  ++A D+   + V  + V F+Q +  E    +E    L+D+ +   D+V+SDMA
Sbjct: 83  VGELHGTIVALDMLPMEAV--EGVHFIQGDFREAEVLAELERTLVDKGVQQVDLVVSDMA 140

Query: 114 PRTTGTRFTDQARSLELCLEALAVADRCLIKGGSFVVKIFMGPDVQELVQAMRQRFSAVK 173
           P  +G   TD AR  +L   A+  A   L   G+ VVK+F G     +V   R+ F  VK
Sbjct: 141 PNLSGIGMTDAARISDLVELAVDFAVHHLKPDGALVVKLFHGGAYDPMVALFRETFRTVK 200

Query: 174 SFKPKSSRAESKETFYVCLGYR 195
           + KPK+SR +S ETF V LG +
Sbjct: 201 AVKPKASRDKSSETFLVGLGLK 222