Pairwise Alignments

Query, 723 a.a., S1 RNA binding domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 750 a.a., Transcriptional accessory protein from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  766 bits (1979), Expect = 0.0
 Identities = 381/708 (53%), Positives = 515/708 (72%), Gaps = 4/708 (0%)

Query: 13  RLAADLGITTAQASAALKLFDEGGTIPFVARYRKEATGGLDEVALTALRDGCERLRTLDK 72
           ++A +L I   Q S  ++L DEG T+PF++RYRKE TG LDEV + A+RD  ++LR LDK
Sbjct: 8   KIAEELNIRQKQVSDTIELLDEGATVPFISRYRKEVTGSLDEVQVAAIRDRVQQLRDLDK 67

Query: 73  RRDAIIASMTEREQLTPDLAKALHAATTLTALEDIYLPFRPKRVTRAAKARERGLAPLAE 132
           RR+AI+ S+ E+E+LTP+L   ++ A T+ ALED+YLP++PKR T+A  ARE+GL PLAE
Sbjct: 68  RREAILKSIKEQEKLTPELEGKINDAETMAALEDLYLPYKPKRRTKATIAREKGLEPLAE 127

Query: 133 RLLEQRGAQAGQLAAPFVDEAKGVPDTAAALAGARDIIAETVSEDRATRATLRDIFVRRA 192
           ++  Q      + A  ++DE K V  T  AL GARDIIAE V+E+   R  +RD+F+   
Sbjct: 128 KIFGQESCDLEEEAKAYIDEEKEVGSTEEALQGARDIIAEWVNENAELRKKMRDLFIEEG 187

Query: 193 TLRSKVARGKEEQAATYRDHFDRSEHAAAAPAHRLLAMFRGEREELLDVRVRPDDDIAVG 252
              SKV  GKEE+A  Y+D+F+ SE    AP+HR+LAM RGE+E  L +   P++  A+ 
Sbjct: 188 KFVSKVIPGKEEEAIKYKDYFEWSEPIKTAPSHRVLAMRRGEKELFLMLDSCPEELDALA 247

Query: 253 ALHRRWLKGRASSAGTDAAEVATALTDAWNRLLAPSLENEFRTALRERAEAEAIAVFAAN 312
            +     K   ++  T + +V  A+ D + RL+ PS+E E R   +++A+ +AI VFA N
Sbjct: 248 LME----KMTVTAQNTSSEQVKLAIKDCYKRLMKPSMETEVRLYTKKKADEDAIKVFAEN 303

Query: 313 LRELLLAPPMGPRRTLALDPGWRTGAKLVCLDAQGALLHHEVIHPLTGGDRATRAAATLR 372
           LR+LLL  P+G +  +A+DPG+RTG KL CL  QG +LH++ I+P     +   +AA ++
Sbjct: 304 LRQLLLGAPLGEKSVMAIDPGFRTGCKLACLGPQGQVLHYDAIYPNEPQRKKAESAALVK 363

Query: 373 ELCTRHGIEAVAVGNGTAGRETEAFVKSAGLPPHVTVALVDERGASVYSASEVARAEFPD 432
            L  +H +EA+A+GNGTA RETE F KS GLP +V + +V+E GAS+YSASEVAR EFPD
Sbjct: 364 HLVEKHQVEAIAIGNGTASRETEQFFKSIGLPQNVLIVMVNESGASIYSASEVAREEFPD 423

Query: 433 HDVTVRGAISIGRRLMDPLAELVKVDPRSLGVGQYQHDVDQNALRRALEEVVASCVNAVG 492
            D+T+RGA+SIGRRLMDPLAELVK+DP+S+GVGQYQHDVDQ+AL+ +L++ V SCVN VG
Sbjct: 424 LDLTIRGAVSIGRRLMDPLAELVKIDPKSIGVGQYQHDVDQSALKNSLDDTVMSCVNGVG 483

Query: 493 VDVNTASPELLAYVSGIGPALAKGIVALRAVNGPFRTRRDLLKVPRLGPKAFEQAAGFLR 552
           V+VNTAS +LL YVSG+GPALA+ IV  R  NGPF++R D+ KVPRLG KA+EQAAGFLR
Sbjct: 484 VEVNTASKQLLTYVSGLGPALAQNIVNFRNENGPFKSREDIRKVPRLGDKAYEQAAGFLR 543

Query: 553 VHGGPEPLDASAVHPESYAVVRRMAEDTGCSVPDLMRDATRREALRLERYVDDRVGLPTL 612
           +   P PLD SAVHPE Y +V++MA D G +V DL++D   R  + L+ YV + VGLPTL
Sbjct: 544 IQNAPNPLDRSAVHPERYDLVQQMATDLGSNVSDLIKDEELRSKVVLKNYVTETVGLPTL 603

Query: 613 RDIMSELARPGRDPRPAFEVFAFAEGVNKVDDVQPGMELPGIVTNVTKFGAFVDIGVHRD 672
           +DIM ELA+PGRDPR  FEVF+F EGVN++ D++ GM+LPGI+TN+T FGAFVD+GVH+D
Sbjct: 604 QDIMEELAKPGRDPRETFEVFSFQEGVNEMKDLKVGMKLPGIITNITNFGAFVDVGVHQD 663

Query: 673 GLVHVSQLADRFVRDPAEVVAPGRKVRVRVLDVDRQRERINLTLKGVP 720
           GLVH+S LADR++ DP EVV   +KV V V++VD  R+RI L++K  P
Sbjct: 664 GLVHLSHLADRYISDPNEVVTVNQKVEVTVMEVDLNRKRIGLSMKSAP 711