Pairwise Alignments

Query, 341 a.a., major head protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 342 a.a., Phage major capsid protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 77.8 bits (190), Expect = 4e-19
 Identities = 90/348 (25%), Positives = 143/348 (41%), Gaps = 29/348 (8%)

Query: 10  FEARTLTGIITVRPWFNSLFLSLFFPESRRNTLLTDTAAVELE-MYGK-ELAPFVTDYEG 67
           F  R L G    +  FN LFLSLFF    R T+   T  V L+ + GK  +A +V+   G
Sbjct: 4   FTTRQLLGYTEQKVKFNPLFLSLFF----RRTVTFPTQEVMLDKITGKTPIAAYVSPVVG 59

Query: 68  GTLVENTKREVQAIKTTRMRPKKQFRAADLLKAPQLGRDPYNPGAPRDRILEAVTRELDD 127
           G ++ N   E + ++   ++PK +   A +++    G DP     P  R L  +T  L  
Sbjct: 60  GKVLRNRGGETRVLRPGYVKPKHEVNYAQVVERLP-GEDPARLNDPAYRRLRILTDNLKQ 118

Query: 128 LKDRITKSLEWMAAQAMQGGIVISQ----DNIQRQIDFLIPASNKVTLTGTDRWTE---S 180
            +  I +  E  A  A+  G    Q    D +  ++DF   A N +      +W+E    
Sbjct: 119 EEKAIVQVEEMQAVSAVLNGKYTMQGEQFDTV--EVDFGRSAGNNIIQATGKKWSEQDRE 176

Query: 181 ASDPSGDFEEWNALVQESGFPANVCVMGDKAWTAFRKNPAIKEELDNKRIELGQLGPNVQ 240
             DP+ D + +    Q SG   N+ VM  K W         +E+LD +R    QL   V+
Sbjct: 177 TFDPTYDLDMY--CDQASGL-INIAVMDGKVWRLLNGFKLFREKLDTRRGSNSQLETAVK 233

Query: 241 RM-----YKGRVNGIDIYHCGTTYTDGAGVSQKLLAPNKVLFTSTELPTSLDFGLPADLE 295
            +     +KG    + I    T+Y    G  ++ L    ++  +T       +G   D +
Sbjct: 234 DLGAVVSFKGYYGDLAIVVAKTSYVADNGTEKRYLPEGTLVLGNTAAEGIRCYGAIQDSQ 293

Query: 296 --CSGPVEIFSKSK---MEDDPSGLFLLAESRPMPWPKIPNGIVIATV 338
               G V      K      DP+  + + +S P+     P+  VI TV
Sbjct: 294 ALAEGIVAATRYPKHWLTVGDPANEYTMTQSAPLMVLPDPDEFVIVTV 341