Pairwise Alignments

Query, 484 a.a., type II/III secretion system protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 690 a.a., Predicted secretion system X protein GspD-like from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  103 bits (257), Expect = 2e-26
 Identities = 107/433 (24%), Positives = 189/433 (43%), Gaps = 61/433 (14%)

Query: 67  EAIAGVVVLSPQQVYVTGKKAGTTTLTLWDGGGAVIGVYDVQVT-------PDIAQLKEM 119
           E + G+V+ + Q   +  K     TL ++    A    Y   VT        D+ Q + M
Sbjct: 232 EEVIGLVLTTNQ---LERKLLNDNTLMIYPNTPAKARDYKELVTRSFFLANADVKQAQAM 288

Query: 120 LHRVLPG-----ENDIMVMGVNDTVTLAGTVRSAASMTTAMDMARLYAPDKVTNLMQVGG 174
           +  ++       +  + +M + DT   A  VR A  + +++DMA                
Sbjct: 289 VRTIVKTRDIFIDEKLNLMIIKDT---AEAVRLAERLLSSLDMAE--------------- 330

Query: 175 VHQVMLEVKVAEMRRNVMERLGIDLTYAWRGDFIFGMLN-QLFTLDSQKGVVDAGPS--G 231
             +VML+V+V E+ R+ ++ LG+     +     +G L   + T     GV  +  +  G
Sbjct: 331 -PEVMLDVEVLEVTRSRLQELGL----RFPDQIGYGRLQPNIATTIVNNGVTQSNTTLGG 385

Query: 232 AVLSPNVNGAFRITSGQVSIMG----FLDVLKQNGLVKVLAEPTLVCRSGEKAEFLAGGE 287
            +    V+   R  SG  S +      L++  + G    LA P +  ++ EKA+   G +
Sbjct: 386 QLAEGYVD--LRNRSGLTSFVANPAITLNLRSEAGDGNTLANPRIRVKNREKAKIHIGDK 443

Query: 288 IPIPVPQGLGTV----AIEYKEFGVTLQFLPTVVGDGRISMKVAPEVSELDYTNVVQIQG 343
           +P+        V    ++ Y + G+ L   P V  D  + +KV  EVS +    V     
Sbjct: 444 LPVFTTTSTANVGVSSSVSYLDVGLKLDVEPNVYLDDEVGIKVQLEVSSV-IREVTGPSN 502

Query: 344 FTIPAITSRRASTTVELADGQSFAIAGLLRDDVRQAVNKYPVLGDMPVLGTLFRSSNWQK 403
                I +R A T + L DG++  +AGL+ D+ R + N+ P LGD+P +G LF S+    
Sbjct: 503 SLAYQIGTRSAGTVLRLRDGETQVLAGLINDEERSSANRLPGLGDIPAIGRLFSSTRDNN 562

Query: 404 NETELVIIVTPHLAKPLEANATRLPTDAYREPSAFEYFILGRMEGSRRADATAAAARTYG 463
           ++TE+V+++TP + +    N  R  ++A+ EP+  E  +     G+      + A RT  
Sbjct: 563 SKTEIVLLITPRIVR----NVARPDSNAFNEPAGSEASV-----GAPPLQLKSTAPRTLS 613

Query: 464 TTGAGAPSGMEGA 476
            +G G  +    A
Sbjct: 614 LSGGGGGAAPRAA 626