Pairwise Alignments

Query, 776 a.a., outer membrane protein, OMP85 family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 755 a.a., outer membrane protein assembly factor BamA from Magnetospirillum magneticum AMB-1

 Score = 87.4 bits (215), Expect = 3e-21
 Identities = 114/468 (24%), Positives = 196/468 (41%), Gaps = 35/468 (7%)

Query: 334 ADDILDAVARIPVFLHERGHPFAVVTGTRFEVDHAAHTLHATVTVDPGPYVLMGGLDVEG 393
           AD + D V R+   +  +G+ F  V   + + +   HT+  T  +  GP V +  +D+ G
Sbjct: 298 ADQVEDIVQRLTDAVGTKGYAFVDVK-PQVQRNRETHTIDITYEIKEGPRVFVERIDISG 356

Query: 394 ADDVSRDYVATYVGWRPGQPWDERLVERFRESLRGTGLFSGMEVVPADHDDATGCRPVMA 453
                   +        G  ++   + R R+ L+    F   EV     D A     +  
Sbjct: 357 NVRTLDQVIRREFRLVEGDAFNSAKLRRSRQRLKDLNFFEKAEVTNIPSDTAPDRTIIKV 416

Query: 454 RLTYGPPRSFGGGLRYDSALGPGVLAFWEHRNLWGGGERLRLELPVWERRQEVVASFRKP 513
            +          G+ + S+ GP + A    RNL G G+ LRL   +  +R  +  SF +P
Sbjct: 417 DVQEKSTGELMFGVGWASSAGPIIEASLRERNLLGRGQDLRLGAGLGTKRSSLDLSFTEP 476

Query: 514 FLLRPD-----QDFIADAWARNENS-DAY----DQRAG-AVSASVERRISRHLWASAGGT 562
           + +  +       F+ D   + E+S DA     D RAG  +S S+ + +   ++     T
Sbjct: 477 YFMDREVAAGFDAFVIDRKLQKESSYDASSIGGDLRAGYRLSESLRQDV---IYTLKQDT 533

Query: 563 TEGGSINDHQGPERSYSMWG--VPLTIRYDGTDNLLDPHEGVRAALSTTPYTGVYHEWRS 620
            +G S       E+  S     +  ++ YD  D+ LDP EG    L T    G+  + R 
Sbjct: 534 VKGISSTSPYVLEQIGSKVSSVIGQSLMYDRRDSRLDPTEGYFIKLGTDG-AGLGGDIR- 591

Query: 621 MVRSRLDASAYTALPGGRTVLALRAAAGALHGESPADIPASFRFYSGGGGSVRGYAYQSL 680
            +R  L    Y  L   + +L + ++ G ++G     +  + RF+  GG ++RG+A   +
Sbjct: 592 YLRGTLTGGQYFTLT-DKVILGVSSSVGYIYGLDQR-VRITDRFFV-GGDNLRGFANGGV 648

Query: 681 GPRD---GDVPLGG--GSFGEVGLEARTRITETLGL--VTFVDGGNVYE-----ESMPRF 728
            PRD   GD  LGG   + G   ++    + E  G+    F D G V E      +  + 
Sbjct: 649 SPRDKNTGDA-LGGIWQAVGSAQVKFPLGLPEEFGVSGQAFTDIGAVGETDTADTAAVQQ 707

Query: 729 GDGMRFGAGVGLRYYTAIGPLRFDVATPVNPREDDAPLQFYFSIGQSF 776
              +R   GVG+ + + +GP+  D+  P+   + D    F F+ G  F
Sbjct: 708 SSSVRVSPGVGISWKSPMGPVSVDLGYPLVKEKFDKKEFFRFNFGTKF 755