Pairwise Alignments

Query, 776 a.a., outer membrane protein, OMP85 family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 578 a.a., outer membrane protein assembly factor from Serratia liquefaciens MT49

 Score = 88.6 bits (218), Expect = 9e-22
 Identities = 103/445 (23%), Positives = 173/445 (38%), Gaps = 48/445 (10%)

Query: 351 RGHPFAVVTGTRFEVDHAAHTLHATVTVDPGPYVLMGGLDVEGADDVSRDYVATYVGWRP 410
           +G+  A +T ++  V    H  +  +  D G     G +   G+  +  DY+   V +  
Sbjct: 157 KGYFDADMTKSQLGVAEDLHKAYWDIDFDSGQRYRFGQVKFTGSQ-IREDYLQNLVPFHQ 215

Query: 411 GQPWDERLVERFRESLRGTGLFSGMEVVPADHDDATGCR--PVMARLTYGPPRSFGGGLR 468
           G  +    +      L  T  F+ + V P D  DA   +  P+ A ++     +   G+ 
Sbjct: 216 GDYYTSEDLAELNRRLSATNWFNSVVVSP-DFKDAKENKILPLDALVSPRTRNTIETGVG 274

Query: 469 YDSALGPGVLAFWEHRNLWGGGERLRLELPVWERRQEVVASFRKPFLLRP-DQDFIADAW 527
           Y + +GP V   W+   L   G  L     +    Q++  +++ P L  P +Q ++    
Sbjct: 275 YSTDVGPRVKGTWKKPWLNDRGHSLETSASISAPEQQLDLTYKIPLLKNPLEQYYLLQGG 334

Query: 528 ARNEN--------SDAYDQRAGAVSASVERRIS------RHLWASAGGTT----EGGSIN 569
            +N +        S     R   +S+  +R I+           +   TT     G S+N
Sbjct: 335 LKNVDLNDTKSVTSKVVASRNWDLSSGWQRAINLTWRWDNFTQGNVSNTTMLLYPGVSLN 394

Query: 570 DHQGPERSYSMWGVPLTIRYDGTDNLLDPHEGVRAALSTTPYTGVYHEWRSMVRSRLDAS 629
             +        WG       D +D       GV  AL         + W   +R+  D  
Sbjct: 395 RTRSRGGLMPTWGDSQRYSIDVSDTTWG--SGVDFALMQAQ-----NVW---IRTLADKH 444

Query: 630 AYTALPGGRTVLALRAAAGALHGESPADIPASFRFYSGGGGSVRGYAYQSLGPRDGDVPL 689
            + A          R   G +       +P   RF++GG  S+RGY Y+ + PR+ D  L
Sbjct: 445 RFVA----------RGQVGWIETNDFDKVPPDLRFFAGGDRSIRGYKYKDISPRNDDGKL 494

Query: 690 GGGSFGEVG-LEARTRITETLGLVTFVDGGNVYEESMPRFGDGMRFGAGVGLRYYTAIGP 748
            G S    G LE +  +T       FVD G    +         + GAGVG+R+ + +GP
Sbjct: 495 TGASKMLTGSLEYQYNVTGKWWGAMFVDSGEAVNDIKQ---SNFKTGAGVGVRWQSPVGP 551

Query: 749 LRFDVATPVNPREDDAPLQFYFSIG 773
           ++ D+A PV  + D   +QFY  +G
Sbjct: 552 VKLDIAAPVGDK-DTHGMQFYIGLG 575