Pairwise Alignments

Query, 641 a.a., ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 559 a.a., energy-dependent translational throttle protein EttA from Magnetospirillum magneticum AMB-1

 Score =  321 bits (822), Expect = 6e-92
 Identities = 199/539 (36%), Positives = 298/539 (55%), Gaps = 29/539 (5%)

Query: 14  GGRPLLDGATLHVEAGERLCLVGRNGAGKSTLLRLMAGDLRPDAGEVVRAQGTRFGHMPQ 73
           GG+ ++ G TL    G ++ ++G NGAGKSTLL++MAG  +   GE   A+G + G++ Q
Sbjct: 19  GGKEIMKGLTLSFLPGAKIGVLGVNGAGKSTLLKIMAGIDKEYGGEAWAAEGVKIGYLAQ 78

Query: 74  ----DVPAHLSGSVYEVVAEGMGP----DGVALAAYHRLETGH-----ADSGTLDAARHH 120
               D    + G+V E VAE        + V+      L         A+ G L     H
Sbjct: 79  EPHLDPAKDVMGNVMEAVAETKALLDRFEEVSAKFAEELSDDEMNDLIAEQGELQEKIDH 138

Query: 121 LDTGNGWERHGDMMTVLNHLHLDP-DARFEELSGGLKRRALLARALVSSSDVLL-DEPTN 178
           L   N W+    +   ++ L   P DA    LSGG +RR  L R L+S  D+LL DEPTN
Sbjct: 139 L---NAWDLTRTIEIAMDALRCPPGDADVTTLSGGERRRIALCRLLLSHPDMLLLDEPTN 195

Query: 179 HLDIEAISWLEDFLQRRARTLVFVTHDRTFLRHLATRIVELDRGQLFAYDCGYDAYLERR 238
           HLD E+++WLE FL+  + T+V +THDR FL ++   I+EL+RG    Y+  Y ++LE++
Sbjct: 196 HLDAESVAWLERFLEDYSGTVVMITHDRYFLDNVTGWILELERGHGIPYEGNYTSWLEQK 255

Query: 239 EERLENETRQNALFDKKLAQEEAWIRQGVKARRTRNMGRVRALQALRSERAERRERMGTA 298
            +RLE E R+     + +  E  W+R   KAR+T++  R+ A + L ++  E+    G A
Sbjct: 256 GKRLEQEEREETARMRAIRDELEWVRSSPKARQTKSKARISAFEDLVAKSQEKAT--GPA 313

Query: 299 AMRVHEAERSGKLVIEATGVTFAHGDSEPVLRDVDVCIQRGDRVGLIGPNGAGKTTLLRI 358
            + +    R G  VIEA  V+ A GD+  +  +++  +  G  VG+IGPNGAGKTTL R+
Sbjct: 314 VISIPPGPRLGGKVIEAENVSKAFGDNL-LYENLNFRLPPGGIVGIIGPNGAGKTTLFRM 372

Query: 359 LLGDLEPQQGRVRHGTRLEVAYFDQMREALDIDANAMDNVANGNDRVTVNGVNRHVAGYL 418
           + G  +P  G    G  + + Y DQ R++LD D  A + +++G + + +     +   Y 
Sbjct: 373 ITGQEQPTTGSFTVGETVVLGYVDQSRDSLDPDKTAFEEISDGQEEIDLGKRKINARAYA 432

Query: 419 REFLFDDDRMRIAVRHLSGGERNRLLLARLFLRPSNVLVLDEPTNDLDVETLELLEELLT 478
             F F     +  V  LSGGERNR+ LA++  RP+NV++LDEPTNDLDVETL  LE+ L 
Sbjct: 433 GLFNFKGADQQKKVGVLSGGERNRVHLAKMLSRPANVILLDEPTNDLDVETLSALEDALA 492

Query: 479 DYSGTVLLVSHDRTFLDNVVTSTIALEGQGIVREYIGGYEDWLRQR--------DEPQR 529
           ++ G  +++SHDR FLD + T  +A EG   V  + G Y+D+   R        D+P R
Sbjct: 493 EFPGCAVVISHDRFFLDRIATHILAFEGDSQVVWFEGNYQDYEADRHRRLGTDADQPHR 551



 Score =  113 bits (283), Expect = 2e-29
 Identities = 96/319 (30%), Positives = 147/319 (46%), Gaps = 58/319 (18%)

Query: 318 VTFAHGDSEPVLRDVDVCIQRGDRVGLIGPNGAGKTTLLRILLGDLEPQQGRVRHGTRLE 377
           +T A+   + +++ + +    G ++G++G NGAGK+TLL+I+ G  +   G       ++
Sbjct: 13  LTKAYPGGKEIMKGLTLSFLPGAKIGVLGVNGAGKSTLLKIMAGIDKEYGGEAWAAEGVK 72

Query: 378 VAYFDQ---MREALDIDANAMDNVANG-----------------------NDRVTVNGVN 411
           + Y  Q   +  A D+  N M+ VA                         ND +   G  
Sbjct: 73  IGYLAQEPHLDPAKDVMGNVMEAVAETKALLDRFEEVSAKFAEELSDDEMNDLIAEQGEL 132

Query: 412 RHVAGYL------REFLFDDDRMRIA-----VRHLSGGERNRLLLARLFLRPSNVLVLDE 460
           +    +L      R      D +R       V  LSGGER R+ L RL L   ++L+LDE
Sbjct: 133 QEKIDHLNAWDLTRTIEIAMDALRCPPGDADVTTLSGGERRRIALCRLLLSHPDMLLLDE 192

Query: 461 PTNDLDVETLELLEELLTDYSGTVLLVSHDRTFLDNVVTSTIALE-GQGIVREYIGGYED 519
           PTN LD E++  LE  L DYSGTV++++HDR FLDNV    + LE G GI   Y G Y  
Sbjct: 193 PTNHLDAESVAWLERFLEDYSGTVVMITHDRYFLDNVTGWILELERGHGI--PYEGNYTS 250

Query: 520 WLRQRDEPQRPAREARDVATATQPAERRAVDTRPRKLTFKEQRELAEARDELEQL--PAR 577
           WL Q+   +R  +E R+     + A  RA+         +++ E   +  +  Q    AR
Sbjct: 251 WLEQKG--KRLEQEERE-----ETARMRAI---------RDELEWVRSSPKARQTKSKAR 294

Query: 578 LEALETEQAVLERRLADPA 596
           + A E   A  + +   PA
Sbjct: 295 ISAFEDLVAKSQEKATGPA 313



 Score = 84.3 bits (207), Expect = 1e-20
 Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 28/248 (11%)

Query: 3   LLSLQNITLNLGGRPLLDGATLHVEAGERLCLVGRNGAGKSTLLRLMAGDLRPDAGEVVR 62
           ++  +N++   G   L +     +  G  + ++G NGAGK+TL R++ G  +P  G    
Sbjct: 327 VIEAENVSKAFGDNLLYENLNFRLPPGGIVGIIGPNGAGKTTLFRMITGQEQPTTGSFTV 386

Query: 63  AQGTRFGHMPQDVPAHLSGSVYEVVAEGMGPDGVALAAYHRLETGHADSGTLDAARHHLD 122
            +    G++ Q               + + PD     A+  +  G          +  +D
Sbjct: 387 GETVVLGYVDQS-------------RDSLDPD---KTAFEEISDG----------QEEID 420

Query: 123 TGNGWERHGDMMTVLNHLHLDPDARFEELSGGLKRRALLARALVSSSDV-LLDEPTNHLD 181
            G           + N    D   +   LSGG + R  LA+ L   ++V LLDEPTN LD
Sbjct: 421 LGKRKINARAYAGLFNFKGADQQKKVGVLSGGERNRVHLAKMLSRPANVILLDEPTNDLD 480

Query: 182 IEAISWLEDFLQRRARTLVFVTHDRTFLRHLATRIVELD-RGQLFAYDCGYDAYLERREE 240
           +E +S LED L       V ++HDR FL  +AT I+  +   Q+  ++  Y  Y   R  
Sbjct: 481 VETLSALEDALAEFPGCAVVISHDRFFLDRIATHILAFEGDSQVVWFEGNYQDYEADRHR 540

Query: 241 RLENETRQ 248
           RL  +  Q
Sbjct: 541 RLGTDADQ 548