Pairwise Alignments

Query, 582 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  229 bits (584), Expect = 2e-64
 Identities = 164/580 (28%), Positives = 285/580 (49%), Gaps = 53/580 (9%)

Query: 1   MKLTHKLAIAFGSLVLVIIVVGGFSVNRLGLIHDDVQEIASNWIPSIKILAKMQGDMNRI 60
           + +  +  + F  + L++I++G F+VNR+  I     E+ +  +PS+  L  +  ++ R+
Sbjct: 6   LNIAPRAFLGFAFIALLVILLGVFAVNRMAQIRQSSVEMTATQLPSVTSLGVITENVLRL 65

Query: 61  RRQQLQHIIATDASAIASIESNIEKLKQQLQDSARIYEKLVSDPSERGNFEKFLDHTRQY 120
           R    + ++  + +++   E+ I  L  +++ +   Y  L + P E   ++ F+     Y
Sbjct: 66  RILSFRVLVNREPASLQEAETRIGVLVDKVKTAQASYAALPAGPEEAALYKTFMVTLDNY 125

Query: 121 YRAMDKGMELSRVNKNVEAAALDRSEIRGHFQAAMDALYAAVEINDKGSAQSAAEATNVV 180
            +A    + LS+  K  E  AL  S I+       + L   + IN   +  +  +A    
Sbjct: 126 LKAQADMLALSKQGKVDEMRALINSRIKDGTDQMGEQLNKLIAINVADAKTADTDAGQSY 185

Query: 181 SSARTFSIVLVLVAIAIGAGAGVYIVRGTMAQLGEDPGYLYDVSREIASGNLDIHFRESS 240
             A T  I + + A  +       + R  +  L +      +V+  IA GNL        
Sbjct: 186 DGAITGVIAVSVAAALLTVLLAWLLTRSIVTPLRK----AVEVAETIAGGNL-------- 233

Query: 241 HRQGVYSAVQDMVTTLKAKIAEADEKSEQARRKEQEAQQATLEAEEARRQAERAKAEGML 300
                            +K  E D K E AR        AT++A              + 
Sbjct: 234 -----------------SKAIEDDGKDEPARLL---GALATMQAN-------------LR 260

Query: 301 QAAVKLEGVVEVLSSASEELSAQIEQSDRGAEEQARRVGETATAMEEMNATVLEVARNAG 360
           Q    + G    L+SA+EELSA  E++ +G ++Q   + + ATA+ EM A V EVARNA 
Sbjct: 261 QTIQHIAGSATQLASAAEELSAVTEEASKGLQQQNNEIDQAATAVNEMTAAVEEVARNAV 320

Query: 361 QAADIAENTRRKAESG----AEIVGRVVTGISEVQSQSVALKHDMEDLGRQAEAIGQIMN 416
             ++ +  + + A  G     E VG + T   +VQ+ +  +    E L  Q   IG++++
Sbjct: 321 STSEASSQSNQAAREGRDRVVETVGAIQTMTQDVQNTAAMI----EGLATQGRDIGKVLD 376

Query: 417 VISDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMQATTEVGNAIRGVQG 476
           VI  IA+QTNLLALNAAIEAARAGEAGRGFAVVADEVR LA +T Q+T E+   + G+Q 
Sbjct: 377 VIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTAQSTQEIEKMVAGIQN 436

Query: 477 GTRKNMDNVDRSVKTIEEATQAARLSGEALREIVKMVDTVSDQVRGIATASEQQSAASEE 536
           GT + + ++ +S +  +   + AR +G AL +I + +  ++++   IA+ASE+Q+  S E
Sbjct: 437 GTGEAVQSMQQSNQRTQTTLEMARAAGVALEQITQSISLINERNLVIASASEEQAQVSRE 496

Query: 537 INKSVEQVSAISAETAQAMREAATAVQELANQSQVLKRLV 576
           +++++  +  ++ ++A    + + A  EL+  +  L  +V
Sbjct: 497 VDRNLVNIRDLATQSAAGANQTSAASHELSRLAVDLNGMV 536