Pairwise Alignments

Query, 582 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  253 bits (647), Expect = 1e-71
 Identities = 166/576 (28%), Positives = 289/576 (50%), Gaps = 45/576 (7%)

Query: 1   MKLTHKLAIAFGSLVLVIIVVGGFSVNRLGLIHDDVQEIASNWIPSIKILAKMQGDMNRI 60
           + +  +  + FG L L++  +GGF++ ++  +     ++ +NW+PS+  +  M  D+ RI
Sbjct: 6   LNIAPRAGLGFGVLALMVFALGGFALLQMANMRQQSDQVENNWLPSVMAVGDMSQDLLRI 65

Query: 61  RRQQLQHIIATDASAIASIESNIEKLKQQLQDSARIYEKLVSDPSERGNFEKFLDHTRQY 120
           R   L+ ++  D  A+A  E  + ++K  L  +  +Y+ L+  P+E+  F++F     +Y
Sbjct: 66  RALTLRLLVNRDPQALAQNEQKLTEIKANLHRARTLYQGLIVLPAEQVLFDRFKAEEARY 125

Query: 121 YRAMDKGMELSRVNKNVEAAALDRSEIRGHFQAAMDALYAAVEINDKGSAQSAAEATNVV 180
               ++ + LS+ N+  +A  +   E+          L   V +N   + Q+A+ A +V 
Sbjct: 126 LERQEQVVTLSKANQLEDAIRVVNGEMNQLADEMAATLRELVTLNKTSANQAASLAQSVF 185

Query: 181 SSARTFSIVLVLVAIAIGAGAGVYIVRGTMAQLGEDPGYLYDVSREIASGNLDIHFRESS 240
           S +R + I ++++   +  G  V + R  +  L +       V++ +ASG+L        
Sbjct: 186 SQSRIWVIGMIVLTALVTIGLAVLLTRSIVLPLAQS----LKVAQGVASGDL-------- 233

Query: 241 HRQGVYSAVQDMVTTLKAKIAEADEKSEQARRKEQEAQQATLEAEEARRQAERAKAEGML 300
                                   E S   R +    QQA    +E  R   R  +E   
Sbjct: 234 ----------------------TGEISVCGRDEPARLQQALKSMQENLRDTIRRISESSN 271

Query: 301 QAAVKLEGVVEVLSSASEELSAQIEQSDRGAEEQARRVGETATAMEEMNATVLEVARNAG 360
           Q           L+SASEELS   E + RG  +Q++ + + ATA+ +M A V EVA NA 
Sbjct: 272 Q-----------LASASEELSCVTEDATRGLHQQSQEIEQAATAVNQMTAAVEEVASNAV 320

Query: 361 QAADIAENTRRKAESGAEIVGRVVTGISEVQSQSVALKHDMEDLGRQAEAIGQIMNVISD 420
             +  +  + R A+ G E V + V  I  + +        +EDL ++   I ++++VI  
Sbjct: 321 ATSQASRESDRIAQRGREQVQQTVVSIEALATDVTDNVTQVEDLAQKVYGISKVLDVIRS 380

Query: 421 IADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMQATTEVGNAIRGVQGGTRK 480
           IA+QTNLLALNAAIEAARAG+AGRGFAVVADEVR LA +T Q+T E+   I G+Q GT +
Sbjct: 381 IAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQQSTQEIEQMISGIQQGTDQ 440

Query: 481 NMDNVDRSVKTIEEATQAARLSGEALREIVKMVDTVSDQVRGIATASEQQSAASEEINKS 540
            + ++ +S          A+ +G AL EI      ++++   IA+ASEQQ+A + E++++
Sbjct: 441 AVSSMQQSNTRARSTLDIAKSAGTALEEIASAFTLINERNLVIASASEQQAAVAREVDRN 500

Query: 541 VEQVSAISAETAQAMREAATAVQELANQSQVLKRLV 576
           +  +  ++ +T+    + + A  +L+  +  L  LV
Sbjct: 501 LMNIRDLAHQTSTGANQTSAASHDLSRLAVDLNTLV 536