Pairwise Alignments

Query, 187 a.a., conserved domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 509 a.a., Putative secreted protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 19/179 (10%)

Query: 7   EALNLYAVRVARGEGVKQDFARAASLFRRADRCGFNCEPVYDDMVNDFRDKAFGMELVSS 66
           EA +   V   +GEGV QD+ +A + +R+A R G      +  +++     AFG  +  S
Sbjct: 313 EAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMS-----AFGRGVAQS 367

Query: 67  KRA----FLKALRPETAEARCTVGEAF-IGQGDADSLRTGRELLTSAATLGSGKAMYLLG 121
            R     + KA + + A+A+  +G A+  G+G  ++ R   +    AA  G   A   LG
Sbjct: 368 DRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQGFTPAQSALG 427

Query: 122 VLCRDGK-GVAANAERAFMWFSLAA--------SCGFAKAESERVNAEGKLDDAGRTRA 171
            +   G+ GV  + ++A++W+ +A+         C    AE  R+      D    T A
Sbjct: 428 EIYAHGRQGVPKDNKQAYIWYYMASMYTEKSKDDCSALIAERNRLKGTLTPDQLSETYA 486



 Score = 40.0 bits (92), Expect = 7e-08
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 1/85 (1%)

Query: 70  FLKALRPETAEARCTVGEAFI-GQGDADSLRTGRELLTSAATLGSGKAMYLLGVLCRDGK 128
           + +A     AEA+  +G  F+ G+G +   +        AA  G   A   LG++   G+
Sbjct: 303 YRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGR 362

Query: 129 GVAANAERAFMWFSLAASCGFAKAE 153
           GVA +  +A  W+  AA   FAKA+
Sbjct: 363 GVAQSDRQAIAWYRKAAKQDFAKAQ 387



 Score = 36.6 bits (83), Expect = 8e-07
 Identities = 33/137 (24%), Positives = 56/137 (40%), Gaps = 4/137 (2%)

Query: 19  GEGVKQDFARAASLFRRADRCGFNCEPVYDDMVNDFRDKAFGMELVSSKRAFLKALRPET 78
           GEGV QD+ +A           +    +    +N   DKA   + V S+  + K  +   
Sbjct: 219 GEGVPQDYRQAVYWLNEGIPGSYTPGHI---PLNALYDKAHPADRVHSQTWYRKTAQRVM 275

Query: 79  AEARCTVGEAFI-GQGDADSLRTGRELLTSAATLGSGKAMYLLGVLCRDGKGVAANAERA 137
           A+ +   G  +  G           E    AA  G  +A   +GV+   G+GV+ + ++A
Sbjct: 276 AKVQYNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQA 335

Query: 138 FMWFSLAASCGFAKAES 154
             W+  AA  G   A++
Sbjct: 336 LAWYRKAARQGLPAAQT 352



 Score = 30.8 bits (68), Expect = 4e-05
 Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 2/81 (2%)

Query: 105 LTSAATLGSGKAMYLLGVLCRDGKGVAANAERAFMWFSLAASCGFAKAESERVNAEGKLD 164
           L  A   GS  + ++LG     G+    + ++A  W+  AA  G   + ++ +  +  + 
Sbjct: 78  LEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKAAELG--DSSTQEILGDAYMY 135

Query: 165 DAGRTRAMQLAARWRRQYLAP 185
             G  +  QLA  W R+  +P
Sbjct: 136 GDGFPQNTQLALEWYRKAASP 156



 Score = 28.1 bits (61), Expect = 3e-04
 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 103 ELLTSAATLGSGKAMYLLGVLCRDGKGVAANAERAFMWFSLAAS----CGFAKAESERVN 158
           E    AA LG      +LG     G G   N + A  W+  AAS     G  + +    +
Sbjct: 112 EWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASS 171

Query: 159 AEGKL 163
           A+ KL
Sbjct: 172 AQFKL 176