Pairwise Alignments

Query, 277 a.a., TPR domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 593 a.a., tetratricopeptide repeat protein from Paraburkholderia sabiae LMG 24235

 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 51/184 (27%), Positives = 72/184 (39%), Gaps = 8/184 (4%)

Query: 90  GAETELAERLESIRAGFEKDVAAHAAQHAAKVAHRKEALLRSGQEKLDAGDAPRGRSFLK 149
           G    L  + E   A F+K +A           H  EA L S       G      +  +
Sbjct: 123 GKALRLLSKPEDALASFQKALALDG--------HFFEAALGSADALEILGRPHEAVAAYE 174

Query: 150 RAADEFGHEAGVLTDIGQRLQRAGLLFEAAEMFENAIAAFPKDGHAHAGVVAAYMGLQEY 209
           RAA     +  VL  +G  L  A    EA   FE A+   P++  A  G+  A      +
Sbjct: 175 RAARHAPDDMRVLLGLGLTLNAARRHTEAVTYFERALQQEPENAQALFGIAFAVDAQMNF 234

Query: 210 PKAEMAYTRALKQFGTHPKTLVNMARMYLAWRKRDEAWTHIQRALQLAPGDAEAKALLAE 269
             A + Y RAL+          N+A       + DEA  H++RA++LAP  + A  LL  
Sbjct: 235 DDAVIRYKRALEVLPNSATLHNNIAFTLTCMSRYDEADEHLRRAIELAPDVSNAYKLLGM 294

Query: 270 IEGR 273
            E R
Sbjct: 295 SELR 298



 Score = 47.8 bits (112), Expect = 6e-10
 Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 7/164 (4%)

Query: 103 RAGFEKDVAAHAAQHAAKVAHRKEALLRSGQEKLDAGDAPRGRSFLKRAADEFGHEAGVL 162
           R   E+ + +  A  A +  H  + L   G   L  GD     +F +RA +   H+A   
Sbjct: 61  RQDVERAIESFDASLALQPDHA-DCLNDRGIAALSRGDNEDAANFFRRAVECAPHDALAH 119

Query: 163 TDIGQRLQRAGLLFEAAEMFENAIAAFPKDGH---AHAGVVAAYMGLQEYPKAEMAYTRA 219
            ++G+ L+      +A   F+ A+A    DGH   A  G   A   L    +A  AY RA
Sbjct: 120 CNLGKALRLLSKPEDALASFQKALAL---DGHFFEAALGSADALEILGRPHEAVAAYERA 176

Query: 220 LKQFGTHPKTLVNMARMYLAWRKRDEAWTHIQRALQLAPGDAEA 263
            +      + L+ +     A R+  EA T+ +RALQ  P +A+A
Sbjct: 177 ARHAPDDMRVLLGLGLTLNAARRHTEAVTYFERALQQEPENAQA 220



 Score = 32.0 bits (71), Expect = 3e-05
 Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 3/121 (2%)

Query: 152 ADEFGHEAGVLTDIGQR---LQRAGLLFEAAEMFENAIAAFPKDGHAHAGVVAAYMGLQE 208
           A    HE  V   + +R     RAG L  A   +   +   P D +    +   Y+  Q+
Sbjct: 4   ASPLTHEHAVPASVAERALAFHRAGELDRAEHAYRALLDTQPDDANTRYMLGVLYLQRQD 63

Query: 209 YPKAEMAYTRALKQFGTHPKTLVNMARMYLAWRKRDEAWTHIQRALQLAPGDAEAKALLA 268
             +A  ++  +L     H   L +     L+    ++A    +RA++ AP DA A   L 
Sbjct: 64  VERAIESFDASLALQPDHADCLNDRGIAALSRGDNEDAANFFRRAVECAPHDALAHCNLG 123

Query: 269 E 269
           +
Sbjct: 124 K 124