Pairwise Alignments

Query, 312 a.a., TPR domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 268 a.a., periplasmic subunit of the TolQRA transport system from Pseudomonas putida KT2440

 Score = 79.0 bits (193), Expect = 1e-19
 Identities = 66/254 (25%), Positives = 110/254 (43%), Gaps = 47/254 (18%)

Query: 55  AQADTWSQVQSMRQELATMRGQIDDMRYKLDSFGKSGDVAAMRDQ-LSKHDAALRQIASQ 113
           AQ   + Q+Q M+ +L+  +G I++++          DV+ M+ + L ++    R+I S 
Sbjct: 55  AQGQLFMQLQQMQDQLSRQQGIIEELQ---------NDVSRMKQENLERYQDLDRRINS- 104

Query: 114 FDVELKLDQPQADAAGALAPSTEPGHDGASRFVVAAETKTSGPVTVPPTQSGTLAVSNGT 173
                        AA A  P    G  GAS     A                      G 
Sbjct: 105 ------------GAAPAATPDNSSG-GGASNAAPDAAA--------------------GA 131

Query: 174 PAQQPA-AAKPAAPAADTATALYDTGISSFNSRNYKDALKSFKDFTDTFPNHKLTSNAWF 232
            AQQPA +++P  PA +     YD        +++  A ++F  F   +PN +   NA +
Sbjct: 132 AAQQPAGSSQPGDPAKEKL--YYDAAFDLIKQKDFDKASQAFNAFLRKYPNSQYAGNAQY 189

Query: 233 WQGETNFQMNNFPAAALAYEQVISKFPKSSKLPSALLKQGICFYKTGKKDAGKIRLEELI 292
           W GE N    +   A+ A+ QV  K+PK SK+P +L K      + G  D  K  L++++
Sbjct: 190 WLGEVNLAKGDLQGASQAFAQVSQKYPKHSKVPDSLYKLADVERRMGHTDKVKGILQQVV 249

Query: 293 KKHPDSPEAKRAQQ 306
            ++P +  A+ AQ+
Sbjct: 250 TQYPGTSAAQLAQR 263