Pairwise Alignments

Query, 311 a.a., peptidyl-prolyl cis-trans isomerase domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 445 a.a., molecular chaperone SurA from Pseudomonas simiae WCS417

 Score = 90.5 bits (223), Expect = 7e-23
 Identities = 74/297 (24%), Positives = 140/297 (47%), Gaps = 18/297 (6%)

Query: 4   IRSLLLAALVLCLSATGAAADSLNRIAAVVNGEMITYFDVQAQAAPEILRAGLDPVRDAD 63
           +R L+L AL L  ++  AA   L+++ A+V+ ++I    +  Q   E+ +      R   
Sbjct: 11  LRPLVLGALFLGTASAHAAVQELDKVVAIVDNDVIMQSQLD-QRVKEVQQTIAK--RGGG 67

Query: 64  AEPVRRITRNVLDSMISDILISQEAERLKITVQDSEVDNEYRKIVQRSQLAPEQFERQLA 123
             P   + + VL+ +I + L  Q  +R  I + D E++     I QR+ ++ +QF   LA
Sbjct: 68  VPPTSVLDQQVLERLIVENLQLQIGDRSGIRISDEELNQAVGTIAQRNNMSIDQFRAALA 127

Query: 124 QQGLSADLMRERIRRGILRHRLLGLMIARKVVVTRDEIAKYYEAHKGQFVSGRKVRLGLV 183
             GLS +  R++IRR ++  R+    +A +V V+  E+  +  +  G+     ++ L  +
Sbjct: 128 HDGLSYEDARDQIRREMIISRVRQRRVAERVQVSEQEVKNFLASDLGKMQLSEELHLANI 187

Query: 184 IFPPRDDAD------------ALAAQVKSGAMTFADLAARHSIGPNPQNGGVIGDLLWSD 231
           + P  D A+            A+  ++K+GA  FA +A   S   N   GG +G    + 
Sbjct: 188 LIPTPDSANSEQLNAAAAKTQAIYERLKAGA-DFAQMAIAQSGSDNALEGGDMGWRKAAQ 246

Query: 232 LSMEWRDTLSELKPGDVSRVFLVEGRKAVLQLVASNEGKGQALDDVAEEIENILREP 288
           L   +   LS ++ G +++     G   +L+L+    G+    D+V   + +IL +P
Sbjct: 247 LPPPFDRELSAMEVGGITQPARTPGGFIILKLLEKRGGETSLKDEV--HVRHILVKP 301



 Score = 39.3 bits (90), Expect = 2e-07
 Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 11/126 (8%)

Query: 191 ADALAAQVKSGAMTFADLAARHSIGPNPQNGGVIGDLLWSD---LSMEWRDTLSELKPGD 247
           A  +  +++SG   FA LA   S  P     G  GDL W D   L  E++  +++   G 
Sbjct: 314 AQKIYDRIESGE-DFATLAKSFSEDPGSALNG--GDLNWIDPKALVPEFQQVMADTPQGV 370

Query: 248 VSRVFLVEGRKAVLQLVA--SNEGKGQALDDVAEEIENILREPKMQERLQEYIGQLRSRA 305
           +S+ F  +    VL+++   + +   QA +   ++  N+LR  K  E LQ ++ Q+R  A
Sbjct: 371 LSKPFKTQYGWHVLEVLGRRATDNTNQARE---QQALNVLRNRKYDEELQTWLRQIRDEA 427

Query: 306 VIDIRI 311
            ++ ++
Sbjct: 428 YVENKL 433