Pairwise Alignments

Query, 282 a.a., diaminopimelate epimerase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 268 a.a., diaminopimelate epimerase from Pseudomonas putida KT2440

 Score =  101 bits (252), Expect = 2e-26
 Identities = 79/262 (30%), Positives = 120/262 (45%), Gaps = 14/262 (5%)

Query: 10  FHKLHGCGNDFVFIDNRHLKLSVEAMPDWARSICRRAFGVGADGLVFLDTAPQGHEADYI 69
           F+K H  GND++   +    +  +        IC R  G+G+DG++ +    +G      
Sbjct: 3   FYKYHAAGNDYLVYRDC---VPFDCSKPMISRICDRHRGLGSDGIL-VPVIKEGERLSV- 57

Query: 70  WHFYNADGSRAEMCGNASRCAAVLAVDLGF-AGPRHAFGTDAGIVHAVADVEAGYAKVEL 128
              YN DGS+AE  GN  R       D    AG      T  GIV     V     ++ +
Sbjct: 58  -RIYNTDGSQAEKSGNGLRILCRYLWDQNIVAGSPFEISTKGGIV--TCQVLDNGQRISI 114

Query: 129 TRPRDLAAGT---TLELEGTPFTVHFVNTGVPHAVVFSDSVDGLDLRRLGAALRYHPHFS 185
              +   A T   T++++GTP  +H V+ G PH VVF D       R+LG  +     F 
Sbjct: 115 AMGQAAFANTAAFTVDVDGTPLQLHPVSMGNPHCVVFVDQPTETLARQLGPLIERLSIF- 173

Query: 186 PAGTNANFASIIDRRTIHLRTYERGVEDETYACGTGAAATAFIAHTLGLTDASVGVRTSG 245
           P  TN  F  +IDR+T+ ++ +ERGV   T + GT + A A ++  LGL    V V  +G
Sbjct: 174 PDRTNVQFVRVIDRQTLEVQIWERGV-GYTLSSGTSSCAAAAVSRRLGLVGPRVAVNMAG 232

Query: 246 GEVLGIDIEDGSIFLSGKAVRV 267
           G ++    +D  + + G   RV
Sbjct: 233 GVIMIELDDDYHVLMQGPVCRV 254