Pairwise Alignments

Query, 371 a.a., peptide chain release factor 2, programmed frameshift (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 358 a.a., peptide chain release factor 1 from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  206 bits (525), Expect = 6e-58
 Identities = 130/330 (39%), Positives = 194/330 (58%), Gaps = 11/330 (3%)

Query: 33  RLSEIEKQLSTPDAWNNPEKLTPVLQE-KSMLEGEINRLEALETCRN-DVSEWLLLAEED 90
           R  E+ + L  PD  ++ +K   + +E K + +  +   + L    N D ++ ++  E+D
Sbjct: 11  RFEEVSQLLIQPDVASDMKKFKALNKEYKDLDKIVVEYKKYLNILSNIDNAKQVIATEKD 70

Query: 91  ESAE--ALESLEEQIIRLEQLIEETEMNLLLSGKEDRFAALLEIHPGAGGTEAQDWAEML 148
           E     A E L+E + + E++ E  +  L+     D    ++EI  GAGG EA  +A  L
Sbjct: 71  EDFREMAKEELDELLPQREEMEETLKELLIPKDPNDSKDIIMEIRAGAGGDEASIFAGDL 130

Query: 149 LRMYLRWADTHGYKTEYLDYLDGDEAGIKSVTLRIAGPNAYGLLKGERGIHRLIRISPFD 208
            RMY R+A+  G++ E +D  +G   G K + + ++G + YG LK E G+HR+ R+   +
Sbjct: 131 YRMYSRFAEKMGWRMELMDATEGTSGGYKEIIVGVSGEDVYGKLKFESGVHRVQRVPATE 190

Query: 209 ASGRRHTSFASVDVIPDVGQDIKIEIKDTDLRIDVFRSSGPGGQSVNTTSSAVRVTHIPT 268
             GR HTS ASV V+P+  ++  +EI   D+R D+F SSGPGGQSVNTT SAVR+THIPT
Sbjct: 191 TQGRIHTSVASVVVLPEA-EEFDVEIDMNDIRKDLFCSSGPGGQSVNTTYSAVRLTHIPT 249

Query: 269 GIVAQCQNEKSQHHNKDSALQILRGRLYELELRKLEEEKKAQYGAKDAIGFG---SQIRT 325
           GIVAQCQ++KSQ  N D AL +LR R++E+EL K +E + AQ   K  +G G    +IRT
Sbjct: 250 GIVAQCQDQKSQLKNYDKALAVLRSRIFEVELAKKQEVEGAQ--RKSMVGGGDRSDKIRT 307

Query: 326 YTLQPYRLVKDHRTNTEVGDVEAVLDGRLD 355
           Y   P   V DHR    V ++  V+DG ++
Sbjct: 308 YN-YPQGRVTDHRIGYTVYNLPNVMDGGIE 336