Pairwise Alignments

Query, 371 a.a., peptide chain release factor 2, programmed frameshift (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 354 a.a., peptide chain release factor 1 from Magnetospirillum magneticum AMB-1

 Score =  211 bits (536), Expect = 3e-59
 Identities = 128/335 (38%), Positives = 196/335 (58%), Gaps = 16/335 (4%)

Query: 32  HRLSEIEKQLSTPDAWNNPEKLTPVLQEKSMLEGEINRLEALETCRNDVSEWLLLAEE-- 89
           +R  E+  QLS+ +  ++ + +  + +E S L+  +  ++A    R D+ +   +  +  
Sbjct: 12  YRHDEVRAQLSSGEGMDS-QTIQRLSKELSELDPVVTAVQAFRKAREDMVQAAEMMNDPD 70

Query: 90  --DESAEALESLEEQIIRLEQLIEETEMNLLLSGKEDRFAALLEIHPGAGGTEAQDWAEM 147
             D + E   +L+E++  LE+   E ++ LL   + D   A++E+  G GG EA  +A  
Sbjct: 71  MKDLAEEEFYALKERLPALER---EVQIMLLPKDEADEKNAIIEVRAGTGGEEAALFAAE 127

Query: 148 LLRMYLRWADTHGYKTEYLDYLDGDEAGIKSVTLRIAGPNAYGLLKGERGIHRLIRISPF 207
           L RMY R+A  HG++ E +D  D    G+K  +  I G N +  LK E G+HR+ R+   
Sbjct: 128 LFRMYERYAGLHGWRFEVMDVNDTGIGGVKEASATITGRNVFARLKFESGVHRVQRVPAT 187

Query: 208 DASGRRHTSFASVDVIPDVGQDIKIEIKDTDLRIDVFRSSGPGGQSVNTTSSAVRVTHIP 267
           ++ GR HTS A+V ++P+  +++ I++ D+DLR DV+RS G GGQSVNTT SAVRVTHIP
Sbjct: 188 ESQGRIHTSAATVAIMPEA-EEVDIQLNDSDLRFDVYRSQGSGGQSVNTTDSAVRVTHIP 246

Query: 268 TGIVAQCQNEKSQHHNKDSALQILRGRLYELELRKLEEEKKAQYGAKDAIGFG---SQIR 324
           TG+   CQ EKSQH NK +AL++LR RLYE E    + E+ A    K  +G G    +IR
Sbjct: 247 TGLAVACQQEKSQHKNKATALKLLRARLYERERSAKDAERAA--ARKSQVGSGDRSERIR 304

Query: 325 TYTLQPYRLVKDHRTNTEVGDVEAVLDG-RLDKLL 358
           TY   P   V DHR N  +  ++AV+ G  LD+L+
Sbjct: 305 TYNF-PQGRVTDHRINMTLYKIDAVMSGDALDELV 338