Pairwise Alignments

Query, 371 a.a., peptide chain release factor 2, programmed frameshift (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 361 a.a., peptide chain release factor 1 from Dickeya dadantii 3937

 Score =  201 bits (512), Expect = 2e-56
 Identities = 119/340 (35%), Positives = 192/340 (56%), Gaps = 9/340 (2%)

Query: 24  RLDLAGNRHRLSEIEKQLSTPDAWNNPEKLTPVLQEKSMLEGEINRLEALETCRNDVSEW 83
           +L+    RH   E++  L  P    + ++   + +E + L       +  +  ++D++  
Sbjct: 8   KLEALQERHE--EVQALLGEPSVIADMDRFRALSREYAQLTDITRCFQRWQQTQDDLATA 65

Query: 84  LLLAEEDESAE-ALESLEEQIIRLEQLIEETEMNLLLSGKEDRFAALLEIHPGAGGTEAQ 142
            L+ ++ E  + A + L+      E+L ++ ++ LL    +D     LEI  G GG EA 
Sbjct: 66  ELMLDDPEMRDLAQDELKTAKAASEELEQQLQVLLLPKDPDDERGCFLEIRAGTGGDEAA 125

Query: 143 DWAEMLLRMYLRWADTHGYKTEYLDYLDGDEAGIKSVTLRIAGPNAYGLLKGERGIHRLI 202
            +A  L RMY R+A++  +K E +   DG+  G K +  ++AG  AYG LK E G HR+ 
Sbjct: 126 LFAGDLFRMYSRYAESRRWKVEIMSASDGEHGGYKEMIAKVAGDGAYGQLKFESGGHRVQ 185

Query: 203 RISPFDASGRRHTSFASVDVIPDVGQDIKIEIKDTDLRIDVFRSSGPGGQSVNTTSSAVR 262
           R+   ++ GR HTS  +V V+P+V +    +I   DLRID FRSSG GGQ VNTT SA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPEVPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 263 VTHIPTGIVAQCQNEKSQHHNKDSALQILRGRLYELELRKLEEEKKAQYGAKDAIGFG-- 320
           +TH+PTGIV +CQ+E+SQH NK  AL +L  R+   E++K ++E+ +    ++ +G G  
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLAARIRAAEMQKRQQEEAST--RRNLLGSGDR 303

Query: 321 -SQIRTYTLQPYRLVKDHRTNTEVGDVEAVLDGRLDKLLR 359
             +IRTY   P   V DHR N  +  ++  ++G+LD L++
Sbjct: 304 SDRIRTYNF-PQGRVTDHRINLTLYRLDEAMEGKLDMLIQ 342