Pairwise Alignments

Query, 371 a.a., peptide chain release factor 2, programmed frameshift (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 360 a.a., peptide chain release factor 1 from Agrobacterium fabrum C58

 Score =  208 bits (530), Expect = 2e-58
 Identities = 131/334 (39%), Positives = 196/334 (58%), Gaps = 16/334 (4%)

Query: 33  RLSEIEKQLSTPDAWNNPEKLTPVLQEKSMLEGEINRLEALETCRNDVSEW-LLLAEEDE 91
           R  EIE ++S   A +   KL     E S LE  + ++   E   ++ ++   LLA++  
Sbjct: 15  RFGEIEARMSAGPAADVYVKLA---SEYSELEPVVKKIRDYEKAISEAADLEALLADKTT 71

Query: 92  SAEALESLEEQIIRLEQLIEETE--MNLLLSGKE--DRFAALLEIHPGAGGTEAQDWAEM 147
             +  +  E ++  +E  I E E  M +LL  K+  D  +A+LEI  G GG+EA  +A  
Sbjct: 72  DKDMRDLAEMELPEVETRIRELEKDMQVLLLPKDAADEKSAILEIRAGTGGSEAALFAGD 131

Query: 148 LLRMYLRWADTHGYKTEYLDYLDGDEAGIKSVTLRIAGPNAYGLLKGERGIHRLIRISPF 207
           L RMY R+A T G+K E L   +G+  G K +   I G   +  LK E G+HR+ R+   
Sbjct: 132 LFRMYERFAATKGWKVEVLSASEGEAGGYKEIIATITGRGVFSKLKFESGVHRVQRVPET 191

Query: 208 DASGRRHTSFASVDVIPDVGQDIKIEIKDTDLRIDVFRSSGPGGQSVNTTSSAVRVTHIP 267
           +ASGR HTS A+V V+P+  +DI +EI+  D+RID  R+SG GGQ VNTT SAVR+TH+P
Sbjct: 192 EASGRIHTSAATVAVLPE-AEDIDVEIRPEDIRIDTMRASGAGGQHVNTTDSAVRITHLP 250

Query: 268 TGIVAQCQNEKSQHHNKDSALQILRGRLYELELRKLEEEKKAQYGAKDAIGFG---SQIR 324
           TG++    +EKSQH N+  A+Q+LR RLY++E +K++ E+ A    K  +G G    +IR
Sbjct: 251 TGLIV-TSSEKSQHQNRAKAMQVLRSRLYDIERQKVDSERSAD--RKSQVGSGDRSERIR 307

Query: 325 TYTLQPYRLVKDHRTNTEVGDVEAVLDGRLDKLL 358
           TY   P   V DHR N  +  ++ V++G +D+L+
Sbjct: 308 TYNF-PQGRVTDHRINLTLYKLDRVIEGEIDELV 340