Pairwise Alignments

Query, 507 a.a., glutamate synthase, iron-sulfur cluster-binding subunit, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1481 a.a., L-glutamate synthase(NADPH) alpha subunit from Pseudomonas putida KT2440

 Score =  219 bits (559), Expect = 4e-61
 Identities = 129/320 (40%), Positives = 178/320 (55%), Gaps = 4/320 (1%)

Query: 178  AAMSFGAINYNLHEAMAKAATELGTFYNTGEGGLHPDLY-PYGANTIVQVASGRFGVHKD 236
            A +S GA++   HEA+A+A   LG   N+GEGG  P  Y    ++ I QVA+GRFGV  +
Sbjct: 860  AGISLGALSPEAHEALAEAMNRLGARSNSGEGGEDPSRYGTIKSSKIKQVATGRFGVTPE 919

Query: 237  YLNAGSAVEIKVGQGAKPGIGGHLPGEKIDEEVSRTRMVPKGSDAISPAPHHDIYSIEDL 296
            YL     ++IKV QGAKPG GG LPG K++  +++ R    G   ISP PHHDIYSIEDL
Sbjct: 920  YLVNAEVLQIKVAQGAKPGEGGQLPGGKVNGLIAKLRYAVPGVTLISPPPHHDIYSIEDL 979

Query: 297  LQLICAIKEATQYRVPVSVKIAAVHNAPAIASGIVRAGADIVVIDGFRGGTGAAPTMIRD 356
             QLI  +K+     + VSVK+ A      IA+G+ +A AD++ I G+ GGTGA+P     
Sbjct: 980  AQLIYDLKQVNPQAL-VSVKLVAEAGVGTIAAGVAKAYADLITISGYDGGTGASPLTSIK 1038

Query: 357  NVGIPIELALAAVDDRLRDEGIRNRASIVAAGGVRCSADVVKAIALGADAVYIGTAALIA 416
              G P EL LA     LR   +R +  +   GG++   DV+KA  LGA++   GTA +IA
Sbjct: 1039 YAGAPWELGLAETHQTLRGNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGTAPMIA 1098

Query: 417  VGCTLCGRCYTGKCPWGIATNESRLKKRQNPDEAARRLTNLVRAWGHEIQEMLGGMGLNS 476
            +GC     C+   C  G+AT   +L+K  +       + N       E +E L  +G+ S
Sbjct: 1099 LGCKYLRICHLNNCATGVATQNDKLRK-DHYIGTVDMVINFFTFVAEETREWLAKLGVRS 1157

Query: 477  IESLRGNRDKLRGIGLGDTE 496
            +  L G  D L  +  GDTE
Sbjct: 1158 LGELIGRTDLLEVLP-GDTE 1176



 Score = 34.3 bits (77), Expect = 3e-05
 Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 4/37 (10%)

Query: 123 SQVTNPSIDPLREP--MELRTFLGGRPDRLVFEETPQ 157
           +QVTNP IDPLRE   M L   LG   +R +F+E+P+
Sbjct: 511 AQVTNPPIDPLREAIVMSLEICLGA--ERNIFQESPE 545