Pairwise Alignments

Query, 200 a.a., membrane protein, MarC family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 211 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 86.3 bits (212), Expect = 4e-22
 Identities = 58/208 (27%), Positives = 107/208 (51%), Gaps = 11/208 (5%)

Query: 1   MDNALNILISTWIKLFFVLAPFFVLTMFLALTRSFTPQQQRRTAVKVTVAVYVICMCLYF 60
           M + LN+  S  + L+ VL P   L+MFLA T     Q++ + A   T   ++I +    
Sbjct: 1   MIDDLNLFASQLVTLWVVLEPLSHLSMFLATTSHLDRQERHKVAAMGTAFAFLILVVFTL 60

Query: 61  FGDTIFAIFGITLDAFRIGAGALLFLSAVSLVRGPQPAQEPLAEGD-----ISVVPLAIP 115
            G  +    GI++ AF+I  G +LF  +++++ G        A+ +     I+V P+A P
Sbjct: 61  LGRMLLEAMGISILAFQISGGIILFYFSMTMIFGAMTQHAVTADPERRLVHIAVYPIATP 120

Query: 116 ITVGPATTGALMVMGATVR-TPMERVMGSVS---LLAAVLTVGGLLYLANPIERMLGRIG 171
           I  GP    A+++     R  P+ + + +VS   L++ VL V  + +L + I ++LG  G
Sbjct: 121 IVAGPGAILAMVLFSDNNRGAPLSQHLITVSVLVLMSVVLFV--IFWLGDYIAKVLGEGG 178

Query: 172 ISILTKLTGLILAALAAQIIFTGIRNFL 199
            S+L ++ G++LAA +  ++    + +L
Sbjct: 179 ASLLRRIMGILLAAFSVNLVLNAFQKWL 206