Pairwise Alignments

Query, 294 a.a., site-specific recombinase, phage integrase family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 295 a.a., tyrosine recombinase XerD from Kangiella aquimarina DSM 16071

 Score =  224 bits (571), Expect = 2e-63
 Identities = 110/289 (38%), Positives = 185/289 (64%), Gaps = 2/289 (0%)

Query: 1   MDRWLEHLLVERGLAENTLAAYSADLIELQVFLEERGCLLAEVDEQTLFMHVVDLRRRGM 60
           ++++ + + +E+GL++ TL++Y +DL     +L+++G  L       +  ++ +   +  
Sbjct: 6   IEQFCDQIWMEQGLSDATLSSYRSDLKLFNQWLQKQGKTLTNSGASDIQQYLAERYSKQY 65

Query: 61  AGRTLARHLATLRGFFAFAVGEGELEADPALFLENPKLARNLPDVLTRDEMATILARPDL 120
           + R+ AR L++ R F+ + +    ++ DP   +E+PK+   +P  L+ DE+ ++L++PDL
Sbjct: 66  SSRSTARFLSSARKFYRYLLQSNHIKVDPTQQIESPKIQPPVPKSLSEDEVDSLLSQPDL 125

Query: 121 SDRLGFRDRTMLELMYAAGLRVSELCALRPLDFDAQAGVVRVFGKGAKERIVPVHHVSCA 180
              LG RD+ MLEL+Y++GLR++EL ++       Q GV+RV GKG KERIVP+   +  
Sbjct: 126 DTALGLRDKAMLELLYSSGLRITELISVEMNQIGFQQGVMRVIGKGNKERIVPIGEEALQ 185

Query: 181 LVTAYLRDWRPAFS--PVEPAMFLNRSGKGLSRQAVWKVVKRHVAEAGIHKDISPHTFRH 238
            +  Y+R  R   S   V   +FL+  G+ ++RQ  W  +K +   AGI K +SPHT RH
Sbjct: 186 AIAHYIRYGRAELSKEKVTDWLFLSTRGQRMTRQTFWHRIKFYAKTAGIRKHLSPHTLRH 245

Query: 239 SFATHLLEGGADLRSVQLLLGHADISATEIYTHVQADRLRRIHNAHHPR 287
           +FATHLL  GADLR++Q+LLGH+D+S T+IYT+V  +RL+++H+ HHPR
Sbjct: 246 AFATHLLNHGADLRTLQMLLGHSDLSTTQIYTYVAKERLKQLHSQHHPR 294