Pairwise Alignments

Query, 294 a.a., site-specific recombinase, phage integrase family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola 67-19

 Score =  205 bits (521), Expect = 1e-57
 Identities = 117/290 (40%), Positives = 164/290 (56%), Gaps = 3/290 (1%)

Query: 1   MDRWLEHLLVERGLAENTLAAYSADLIELQVFLEERGCLLAEVDEQTLFMHVVDLRRRGM 60
           ++++L+ L +ER LAENTL++Y  DL  L  +L    C L +     L   + +    G 
Sbjct: 9   IEQFLDALWLERNLAENTLSSYRNDLRSLADWLAHHECSLLQAQPSDLQDFLAERLEGGY 68

Query: 61  AGRTLARHLATLRGFFAFAVGEGELEADPALFLENPKLARNLPDVLTRDEMATILARPDL 120
              + AR L+ +R  F +   E +   DP+  L +PKL + LP  LT  ++  +LA P  
Sbjct: 69  KATSSARLLSAMRRLFQYLYREKQRTDDPSAPLSSPKLPQRLPKDLTEAQVDALLAAPVT 128

Query: 121 SDRLGFRDRTMLELMYAAGLRVSELCALRPLDFDAQAGVVRVFGKGAKERIVPVHHVSCA 180
              +  RD+ MLEL+YA GLRVSEL  L   D   + GVVRV GKG KER+VP+   +  
Sbjct: 129 DQPIELRDKAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIGKGNKERLVPLGEEAVY 188

Query: 181 LVTAYLRDWRPAF--SPVEPAMFLNRSGKGLSRQAVWKVVKRHVAEAGIHKD-ISPHTFR 237
            +  YL   RP          +F +   + ++RQ  W  +K +   A I  + +SPH  R
Sbjct: 189 WLEQYLEYSRPWLLNGQTLDVLFPSNRAQQMTRQTFWHRIKHYATLASIDSNKLSPHVLR 248

Query: 238 HSFATHLLEGGADLRSVQLLLGHADISATEIYTHVQADRLRRIHNAHHPR 287
           H+FATHLL  GADLR VQ+LLGH+D+S T+IYTHV  +RLR +H  HHPR
Sbjct: 249 HAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRLLHQQHHPR 298