Pairwise Alignments

Query, 905 a.a., DNA mismatch repair protein MutS (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 882 a.a., DNA mismatch repair protein MutS from Ralstonia solanacearum PSI07

 Score =  574 bits (1479), Expect = e-168
 Identities = 378/907 (41%), Positives = 506/907 (55%), Gaps = 60/907 (6%)

Query: 4   PSPKLTPMFEQYLRIKEDYPDALLFYRMGDFYELFFDDAETTARELQIALTCRNPNAELK 63
           P  K TPM +QYL++K  +P  L+FYRMGDFYELFF+DAE  AR L I LT R     L 
Sbjct: 17  PFDKHTPMMQQYLKLKSAHPHTLVFYRMGDFYELFFEDAEKAARLLDITLTSRGTTNGLP 76

Query: 64  APMCGVPYHAVEGYISQLLDKGYRVAICEQIEDPKEAKGLVKRAVTRVLTPGTVIDDANL 123
             M GVP+HAVE Y+++L+  G  VAICEQI DP   KG V+R V RV+TPGT+ D A L
Sbjct: 77  IRMAGVPFHAVEQYLAKLVKLGESVAICEQIGDPATTKGPVERKVVRVVTPGTLTDAALL 136

Query: 124 DAKEHNYLGALFWNQDAEAGA----FAWVDVSTGEWSGLYSRKLAELWQWAQKMAPRELL 179
             K +N+L A+         A     AW+++  GE   L      +L +  +++ P E+L
Sbjct: 137 SDKVNNHLLAIAQIPGKRGAAPLVGLAWLNLVGGELR-LMECSAEQLDRELERIRPAEVL 195

Query: 180 LPEGVDTPAMATLGTTQTVRVPARSHFDLKSGTERVMRAQGVADLGSLGLEGKPELVRAC 239
                D    A        R+P   HFD+++G  R+    GVA L + G E     + A 
Sbjct: 196 AD---DATLNAIAYDVARTRLPDW-HFDVEAGARRLREQLGVASLVAFGGETLTAALAAA 251

Query: 240 AALLAYLAQTQKQELSHLAPFKPLNLGRHLIIDEVTERNLELFHRLDGRKGPGTLWHILD 299
            ALL Y A TQ Q L H+      +    + +D  T RNLEL   L G++ P TL+ +LD
Sbjct: 252 GALLNYAAATQGQSLRHVIGLTVEHESEFIGLDTATRRNLELTETLRGQESP-TLFSLLD 310

Query: 300 RTLTPMGGRLLEERMHHPWREASPIRETQQVVEWLFQDDVRREALRTALDLVYDLERLST 359
              T MG RLL   +HHP R+ +  +  QQ +E L   D   ++LR  L  + D+ER++ 
Sbjct: 311 TCATSMGSRLLRHWLHHPLRDRAVPQARQQAIEVLLAGDW--QSLRGTLRTLSDVERITG 368

Query: 360 RIFLNRATPKDFIALRQSLSALPAVRATLERPANPEGTYPTDAETSGDTLPKPLSDMLSA 419
           R+ L  A P+D  +LR +L+ LP VR  L                       P SD    
Sbjct: 369 RLALLSARPRDLSSLRDTLARLPEVRDQL-----------------------PQSDAAQL 405

Query: 420 WDDL-ADYA------DLLRRALTDNPPHLVTEGGLFRPGFDPDLDELLDLAEHGEARLQE 472
            DDL AD A       LL+RA+   P  +V +GG+   G+D DLDEL D++E+    L +
Sbjct: 406 LDDLHADLAIPEDAHALLQRAVMAEPAAMVRDGGVVARGYDADLDELRDISENCGQFLVD 465

Query: 473 LLAEEQTVSGLPKLKLGYNRVFGYFFELSRAGADSVPEHFVRRQTLANAERFTTERLKEL 532
           L A E+  +G+  L++ YNRV G++ E++   A  VP+ + RRQTL NAER+ T  LK  
Sbjct: 466 LEARERERTGIANLRVEYNRVHGFYIEVTNGQAAKVPDDYRRRQTLKNAERYITPELKAF 525

Query: 533 EEKLVSATDRRKTLEYRLFQSLRDTVAEARPRVLFMADMLAHLDFWQSLADVARRNGWVR 592
           E+K +SA DR  + E  L++ L   +    P    +A  LA  D   +LA+ A    W R
Sbjct: 526 EDKALSAQDRALSREKYLYEDLLQKLLPHLPAFKRIAAALAQADVLATLAERAHALSWSR 585

Query: 593 PDVHTGHDIVIREGRHPVVEAMQGSASFVPNDLRMDEKRRLLLITGPNMAGKSTVLRQTA 652
           P +     I +   RHPVVE  Q    FV ND  + E R+LLLITGPNM GKST +RQTA
Sbjct: 586 PALTDAPGIELIRARHPVVE--QQVEQFVANDCALQETRKLLLITGPNMGGKSTFMRQTA 643

Query: 653 IICLLAQMGAFVPAREASIGIADRIFSRVGASDNLAQGQSTFMVEMMETARILRQASKRS 712
           ++ LLA +GAFVPA  A+IG  DRIF+R+GA+D+LA G+STFMVEM E A IL +A+  S
Sbjct: 644 LVVLLAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNS 703

Query: 713 LVILDEIGRGTSTFDGMALAWAVVEELTRRAGGGIRTLFATHYHEITSLEGRIPGVHNMN 772
           LV++DEIGRGTSTFDG+ALAWA+   L   +     TLFATHY E+T L        N++
Sbjct: 704 LVLMDEIGRGTSTFDGLALAWAIARHLL--SHNRSHTLFATHYFELTQLPQEFAQAANVH 761

Query: 773 IAIREWNGDIVFLRRLVPGPADKSYGIEVARLAGVPHSVVQRARELLADLERTRDAARGT 832
           ++  E    IVFL  +  GPA +SYG++VA+LAGVP  V++ AR+ LA LE+        
Sbjct: 762 LSAVEHGDGIVFLHAVQEGPASQSYGLQVAQLAGVPQPVIRAARKRLAWLEQ-------- 813

Query: 833 NSAPSRQTLPGLD---LPSKQEQVDTIVAPPPCSGVEHPLLVALRDIDTDDMTPLEALKR 889
           +SA +  T P LD   LPS     DT  A  P +     L  AL  I  D+MTP EAL  
Sbjct: 814 HSADTGAT-PQLDLFALPSDPSDDDTAEAAAPVA--SSALTEALAGIAPDEMTPREALDA 870

Query: 890 ITEWKQL 896
           +   K L
Sbjct: 871 LYRLKAL 877