Pairwise Alignments

Query, 905 a.a., DNA mismatch repair protein MutS (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 852 a.a., DNA mismatch repair protein MutS from Dickeya dianthicola ME23

 Score =  567 bits (1462), Expect = e-166
 Identities = 352/879 (40%), Positives = 501/879 (56%), Gaps = 47/879 (5%)

Query: 9   TPMFEQYLRIKEDYPDALLFYRMGDFYELFFDDAETTARELQIALTCRNPNAELKAPMCG 68
           TPM +QYL++K  +PD LLFYRMGDFYELF+DDA+  ++ L I+LT R  +A    PM G
Sbjct: 11  TPMMQQYLKLKAQHPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAG 70

Query: 69  VPYHAVEGYISQLLDKGYRVAICEQIEDPKEAKGLVKRAVTRVLTPGTVIDDANLDAKEH 128
           VP+HAVE Y+++L+  G  VAICEQI DP  +KG V+R V R++TPGT+ D+A L  K+ 
Sbjct: 71  VPHHAVENYLAKLVQLGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEALLQEKQD 130

Query: 129 NYLGALFWNQDAEAGAFAWVDVSTGEWSGLYSRKLAELWQWAQKMAPRELLLPEGVDTPA 188
           N L A++  Q+     +A +D+S+G +  +       +    Q+  P ELL PE  +  A
Sbjct: 131 NLLAAVW--QEGRGFGYATLDISSGRFRLVEPVDRETMTAELQRTNPAELLYPETFE--A 186

Query: 189 MATLGTTQTVRVPARSHFDLKSGTERVMRAQGVADLGSLGLEGKPELVRACAALLAYLAQ 248
           M+ +     +R      F+L +  +++    G  DL   G+E     +RA   LL Y   
Sbjct: 187 MSLIEHRHGLRRRPLWEFELDTARQQLNLQFGTRDLTGFGVEQAHLGLRAAGCLLQYAKD 246

Query: 249 TQKQELSHLAPFKPLNLGRHLIIDEVTERNLELFHRLDGRKGPGTLWHILDRTLTPMGGR 308
           TQ+  L H+           +I+D  T RNLEL   L G  G  TL  +LDRT+TPMG R
Sbjct: 247 TQRTSLPHIRGITVERQQDGIIMDAATRRNLELTQNLSG-SGENTLASVLDRTVTPMGSR 305

Query: 309 LLEERMHHPWREASPIRETQQVVEWLFQDDVRREALRTALDLVYDLERLSTRIFLNRATP 368
           +L+  +H P R+   +   QQ +  L   DV  E L+  L  V DLER+  R+ L  A P
Sbjct: 306 MLKRWLHAPIRDVQSLLRRQQAIGAL--RDVAAE-LQPFLRQVGDLERILARLALRSARP 362

Query: 369 KDFIALRQSLSALPAVRATLERPANPEGTYPTDAETSGDTLPKPLSDMLSAWDDLADYAD 428
           +D   +R +   LP + A LE   N E               + L + +  +D+L D   
Sbjct: 363 RDLARMRHAFQQLPDIHALLET-VNAEAV-------------QQLREHVGHFDELRD--- 405

Query: 429 LLRRALTDNPPHLVTEGGLFRPGFDPDLDELLDLAEHGEARLQELLAEEQTVSGLPKLKL 488
           LL RA+ + PP LV +GG+   G++ +LDE   LA+     L++L   E+   G+  LK+
Sbjct: 406 LLERAVVEAPPVLVRDGGVIAGGYNDELDEWRMLADGASDYLEKLEIRERDRLGIDTLKV 465

Query: 489 GYNRVFGYFFELSRAGADSVPEHFVRRQTLANAERFTTERLKELEEKLVSATDRRKTLEY 548
           G+N V GY+ ++SR  +  VP ++VRRQTL NAER+    LKE E+K++++  +   LE 
Sbjct: 466 GFNGVHGYYIQVSRGQSHLVPMNYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEK 525

Query: 549 RLFQSLRDTVAEARPRVLFMADMLAHLDFWQSLADVARRNGWVRPDVHTGHDIVIREGRH 608
            L++ L D +      +   A  LA LD   +LA+ A    ++ P +     I I  GRH
Sbjct: 526 ALYEELFDLLLPHLAELQQSAGALAELDVLANLAERADTLNYICPTLSDKPGIRITGGRH 585

Query: 609 PVVEAMQGSASFVPNDLRMDEKRRLLLITGPNMAGKSTVLRQTAIICLLAQMGAFVPARE 668
           PVVE +  S  F+ N L +  +RRLL+ITGPNM GKST +RQ A+I L+A +G++VPA +
Sbjct: 586 PVVEQVL-SEPFIANPLSLSPQRRLLIITGPNMGGKSTYMRQAALIVLMAHIGSYVPAEQ 644

Query: 669 ASIGIADRIFSRVGASDNLAQGQSTFMVEMMETARILRQASKRSLVILDEIGRGTSTFDG 728
           A +G  DRIF+RVGA+D+LA G+STFMVEM ETA IL  A++ SLV++DEIGRGTST+DG
Sbjct: 645 AMVGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDG 704

Query: 729 MALAWAVVEELTRRAGGGIRTLFATHYHEITSLEGRIPGVHNMNIAIREWNGDIVFLRRL 788
           ++LAWA  E L  +      TLFATHY E+T+L  ++ GV N+++   E    I F+  +
Sbjct: 705 LSLAWACAEALANKIKA--MTLFATHYFELTNLPEKMEGVINIHLDALEHGDTIAFMHSV 762

Query: 789 VPGPADKSYGIEVARLAGVPHSVVQRARELLADLERTRDAARGTNSAPSRQTLPGLDLPS 848
             G A KSYG+ VA LAGVP  V++RAR+ L +LE     A  ++   S+  L   + PS
Sbjct: 763 QEGAASKSYGLAVAALAGVPKDVIKRARQKLKELESLAGHASASHVDGSQLALLTPEEPS 822

Query: 849 KQEQVDTIVAPPPCSGVEHPLLVALRDIDTDDMTPLEAL 887
                              P L AL  ID D +TP +AL
Sbjct: 823 -------------------PALEALEAIDPDALTPRQAL 842