Pairwise Alignments

Query, 905 a.a., DNA mismatch repair protein MutS (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 898 a.a., DNA mismatch repair protein MutS from Bacteroides ovatus ATCC 8483

 Score =  570 bits (1470), Expect = e-166
 Identities = 328/902 (36%), Positives = 523/902 (57%), Gaps = 54/902 (5%)

Query: 8   LTPMFEQYLRIKEDYPDALLFYRMGDFYELFFDDAETTARELQIALTCRNPNAELKAPMC 67
           LTPM +Q+L +K  +PDA++ +R GDFYE +  DA   A  L I LT R         M 
Sbjct: 34  LTPMMKQFLDLKAKHPDAVMLFRCGDFYETYSTDAIVAAEILGITLTKRANGKGKTIEMA 93

Query: 68  GVPYHAVEGYISQLLDKGYRVAICEQIEDPKEAKGLVKRAVTRVLTPGTVIDDANLDAKE 127
           G P+HA++ Y+ +L+  G RVAIC+Q+EDPK  K LVKR +T ++TPG  I+D  L+ KE
Sbjct: 94  GFPHHALDTYLPKLVRAGKRVAICDQLEDPKMTKKLVKRGITELVTPGVSINDNVLNYKE 153

Query: 128 HNYLGALFWNQDAEAGAFAWVDVSTGEWSGL-----YSRKLAELWQWAQKMAPRELLLPE 182
           +N+L A+ + + A  G  A++D+STGE+        Y  KL          AP+E+L   
Sbjct: 154 NNFLAAVHFGK-ASCGV-AFLDISTGEFLTAEGPFDYIDKLLN------NFAPKEILFER 205

Query: 183 GVDTPAMATLGTTQTVRVPARSHFDLKSGTERVMRAQGVADLGSLGLEGKPELVRACAAL 242
           G         G            F   +  E++++     +L   G+E     + A  A+
Sbjct: 206 GKRLMFEGNFGNKFFTFELDDWVFTETTAREKLLKHFETKNLKGFGVEHLKNGIIASGAI 265

Query: 243 LAYLAQTQKQELSHLAPFKPLNLGRHLIIDEVTERNLELFHRLDGRKGPGTLWHILDRTL 302
           L YL  TQ  ++ H+     +   +++ +D+ T R+LEL   ++   G  +L +++DRT+
Sbjct: 266 LQYLTMTQHTQIGHITSLARIEEDKYVRLDKFTVRSLELIGNMND--GGSSLLNVIDRTI 323

Query: 303 TPMGGRLLEERMHHPWREASPIRETQQVVEWLFQDDVRREALRTALDLVYDLERLSTRIF 362
           +PMG RLL+  M  P ++  PI E   VVE+ F+    +E +   L L+ DLER+ +++ 
Sbjct: 324 SPMGARLLKRWMVFPLKDEKPINERLNVVEYFFRQPDFKELIEEQLHLIGDLERIISKVA 383

Query: 363 LNRATPKDFIALRQSLSALPAVRATLERPANPEGTYPTDAETSGDTLPKPLSDMLSAWDD 422
           + R +P++ + L+ +L A+  ++       N           S + + + L+  +S  D 
Sbjct: 384 VGRVSPREVVQLKVALQAIEPIKQACMEADN----------ASLNRIGEQLNLCISIRDR 433

Query: 423 LADYADLLRRALTDNPPHLVTEGGLFRPGFDPDLDELLDLAEHGEARLQELLAEEQTVSG 482
           +A       + + ++PP L+ +GG+ + G + DLDEL  ++  G+  L ++   E   +G
Sbjct: 434 IA-------KEIKNDPPLLINKGGVIQDGVNADLDELRQISYSGKDYLLKIQQRESEETG 486

Query: 483 LPKLKLGYNRVFGYFFELSRAGADSVPEHFVRRQTLANAERFTTERLKELEEKLVSATDR 542
           +P LK+ YN VFGY+ E+     D VP+ ++R+QTL NAER+ T+ LKE EEK++ A D+
Sbjct: 487 IPSLKVAYNNVFGYYIEVRNVHKDKVPKEWIRKQTLVNAERYITQELKEYEEKILGAEDK 546

Query: 543 RKTLEYRLFQSLRDTVAEARPRVLFMADMLAHLDFWQSLADVARRNGWVRPDVHTGHDIV 602
              LE +L+  L   + E  P++   A+ +A LD   S A+VAR N ++RP +     + 
Sbjct: 547 ILILETQLYTDLVQALMEFIPQIQINANQIARLDCLLSFANVARENRYIRPIIEDNDVLD 606

Query: 603 IREGRHPVVEA-MQGSASFVPNDLRMD-EKRRLLLITGPNMAGKSTVLRQTAIICLLAQM 660
           IR+GRHPV+E  +     ++ ND+ +D + +++++ITGPNMAGKS +LRQTA+I LLAQ+
Sbjct: 607 IRQGRHPVIEKQLPIGEKYIANDVMLDSDTQQIIIITGPNMAGKSALLRQTALITLLAQI 666

Query: 661 GAFVPAREASIGIADRIFSRVGASDNLAQGQSTFMVEMMETARILRQASKRSLVILDEIG 720
           G+FVPA  A IG+ D+IF+RVGASDN++ G+STFMVEM E A IL   S RSLV+ DE+G
Sbjct: 667 GSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEAADILNNVSSRSLVLFDELG 726

Query: 721 RGTSTFDGMALAWAVVEELTRRAGGGIRTLFATHYHEITSLEGRIPGVHNMNIAIREWNG 780
           RGTST+DG+++AWA+VE +        RTLFATHYHE+  +E     + N N++++E + 
Sbjct: 727 RGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHELNEMEKSFKRIKNYNVSVKEVDN 786

Query: 781 DIVFLRRLVPGPADKSYGIEVARLAGVPHSVVQRARELLADLE--RTRDAARGTNSAPSR 838
            ++FLR+L  G ++ S+GI VA++AG+P S+V+RA E+L  LE    +    G   A   
Sbjct: 787 KVIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANEILKQLESDNRQQGIAGKPLAEVS 846

Query: 839 QTLPGLDLPSKQEQVDTIVAPPPCSGVEHPLLVALRD----IDTDDMTPLEALKRITEWK 894
           +   G+ L   Q              ++ P+L  +RD    +D +++TP+EAL ++ + K
Sbjct: 847 ENRGGMQLSFFQ--------------LDDPILCQIRDEILNLDVNNLTPIEALNKLNDIK 892

Query: 895 QL 896
           ++
Sbjct: 893 KI 894