Pairwise Alignments

Query, 371 a.a., permease, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 346 a.a., putative inner membrane permease from Escherichia coli BL21

 Score = 63.5 bits (153), Expect = 8e-15
 Identities = 60/259 (23%), Positives = 109/259 (42%), Gaps = 22/259 (8%)

Query: 105 GKRQALGYPLAACFGAVTPFCSCSSVPLFIGFSTAGIPLGITMAFLITSPLVNEVAVVLL 164
           G+ +  G  L   F      C+C + P+  G     + +G  +AF + +P++N   +V +
Sbjct: 105 GQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPATLVFM 164

Query: 165 WGLLGWKLTLVYVGIGLLAGVFGGGCMSWVKAERWLQPFIRQAMRPAGGGLTPFAPLPSA 224
             +LGW     +  I L+AG+     +  +     +Q ++R+         TP    P  
Sbjct: 165 GFVLGWG----FAAIRLVAGL-----VMVLLIATLVQKWVRE---------TPQTQAPVE 206

Query: 225 V-APKMTWRDRHSFAKNETSSIFSRVWKWVIGGVALGAALHGYLPQEWVEETLGKGQWWS 283
           +  P+        + +   +  +S +  +++  + LGAA     P    +  +     W 
Sbjct: 207 IDIPEAQSGFFSRWGRALWTLFWSTIPVYILAVLVLGAARVWLFPH--ADGAVDNSLMWV 264

Query: 284 VPAAVAVGIPLYANVTGIIPVMESLLLKGMPIGTTLALCMSAVGASLPEFIMLKQVMQWR 343
           V  AVA G          IP++++++L GM     LAL M+    SLP  IML++    +
Sbjct: 265 VAMAVA-GCLFVIPTAAEIPIVQTMMLAGMGTAPALALLMTLPAVSLPSLIMLRKAFPAK 323

Query: 344 LLALFGGLLLVLFTCAGWL 362
            L L G ++ V     G L
Sbjct: 324 ALWLTGAMVAVSGVIVGGL 342



 Score = 42.0 bits (97), Expect = 3e-08
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 2/112 (1%)

Query: 246 FSRVWKWVIGGVALGAALHGYLPQEWVEETLGKGQWWSVPAAVAVGIPLYANVTGIIPVM 305
           F  VWK  + GV LG+ +   +P++W+  TLG+ ++          +P         PV 
Sbjct: 74  FLAVWKAAVLGVILGSLIQVLIPRDWLLRTLGQSRFRGTLLGTLFSLPGMMCTCCAAPVA 133

Query: 306 ESLLLKGMPIGTTLALCMSAVGASLPEFIMLKQVMQWRLLA--LFGGLLLVL 355
             +  + + +G  LA  M     +    + +  V+ W   A  L  GL++VL
Sbjct: 134 AGMRRQQVSMGGALAFWMGNPVLNPATLVFMGFVLGWGFAAIRLVAGLVMVL 185