Pairwise Alignments

Query, 481 a.a., TPR domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 478 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440

 Score =  150 bits (379), Expect = 9e-41
 Identities = 124/411 (30%), Positives = 187/411 (45%), Gaps = 18/411 (4%)

Query: 27  LALALTIQGVAPAWAFLGLGGFTI---KDEVELGRKFDVLIKSRMPLVEDPEVKVYVQDI 83
           LA  + + G A     LG     I   + E +LGR +  L++ ++  + DP++K YV+  
Sbjct: 11  LACLMALPGHADDLPSLGDASSAIVSPQQEHQLGRAWLSLLRGQVNQLNDPQLKDYVETS 70

Query: 84  VARLLEQAPPQPFDFKTNVLLHNSLNAFASPGGFIFVHTGLVMQMDHEAEVAGVLAHELA 143
           V +L E +  Q    +  ++    LNAFA+PGG + V+ GL +    E E A VLAHELA
Sbjct: 71  VYKLAETSQLQDRRLEFILIDSRELNAFAAPGGIVGVNGGLFLNAQTEGEYASVLAHELA 130

Query: 144 HATQRHIAGRIEKMQTTSILSMAGALAGAFLGGGSGKGAAMAGSIAAGQSAML----NYS 199
           H +QRH A  +E  Q   +  MA  LAG  L  G G G A  G IA  Q+A +     +S
Sbjct: 131 HLSQRHFARGVEAQQRMQLPMMAALLAGIVLAAG-GAGDAGIGMIAGTQAAAIQEQRRFS 189

Query: 200 RVDETEADEIGLRYLIAAGFRPEGMVGAFEKIRKKQWAMGTDIPSYLSTHPAVNERINSL 259
           R +E EAD IG++ L  AG+ P  M   FE++  +Q+      P +L THP    RI   
Sbjct: 190 RQNEQEADRIGIQNLEKAGYDPRNMPTMFERL-ARQYRYDAKPPEFLLTHPVTESRIADT 248

Query: 260 SARIAALPADIRSRPNDDARFLRVRTICRARY-GDPAVSERLFA----DAPAGDCLAQLG 314
             R    P   +    D  R+  +R      Y G P ++ + F     + P  D  A+ G
Sbjct: 249 RNRADQAP---KGGIEDSMRYQLIRARVALIYEGTPGLAAKRFRAQLDEDPKLDA-ARYG 304

Query: 315 KAILFSRQNRVAEATAAFDKALQCSPKDQLIWREAGRFHYTKGDKGRAAAMLQRATLMNP 374
            A+   +  ++ EA       L  +P D            T      A    +R   + P
Sbjct: 305 LALAQVKGGQLNEAREMLKPLLAKAPNDITYNLAQIDLDITNNRLADAQQRAERMQGLYP 364

Query: 375 DDYMALFFYARLLADSGQPQKSYQYFDEVLRRLPEDAEVHYYYGRVLGASG 425
            +Y      A LL    +P ++ +  +E+++  P+D +V Y    V G SG
Sbjct: 365 GNYPLKQVRADLLVKQNKPAEAEKVLNELVKSRPDDPDVWYDMAEVRGLSG 415



 Score = 25.8 bits (55), Expect = 0.003
 Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 3/102 (2%)

Query: 297 SERLFADAPAGDCLAQLGKAILFSRQNRVAEATAAFDKALQCSPKDQLIWREAGRFHYTK 356
           +ER+    P    L Q+ +A L  +QN+ AEA    ++ ++  P D  +W +        
Sbjct: 356 AERMQGLYPGNYPLKQV-RADLLVKQNKPAEAEKVLNELVKSRPDDPDVWYDMAEVRGLS 414

Query: 357 GDK-GRAAAMLQRATLMNP-DDYMALFFYARLLADSGQPQKS 396
           G+  G   A  +  TL+   D  +    YA+  A    P  S
Sbjct: 415 GNTIGLHRARAEYFTLVGDFDQAIQQLDYAKRRAGGNFPLAS 456