Pairwise Alignments

Query, 404 a.a., outer membrane transport protein, OmpP1/FadL/TodX family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 429 a.a., Long-chain fatty acid transport protein from Pseudomonas simiae WCS417

 Score =  149 bits (376), Expect = 2e-40
 Identities = 112/430 (26%), Positives = 193/430 (44%), Gaps = 31/430 (7%)

Query: 1   MRKVLLVLCLALCPLQAWAAGYGVYEWSARGNALGGAMVARDADPSSVAY-NPAAITDLE 59
           M K  L L +A+     +A+G+ + E    G   G A  +  A+ +S  Y NPA +  LE
Sbjct: 5   MLKTTLSLAVAMASSHIFASGFALNEQDVAGMGTGFAGRSSSAENASTVYGNPAGMARLE 64

Query: 60  GAQIQMGATAIAPTAKMTSNTPGKRDAEFSDSI--WGLPTFYYTQQLSDNYWFGFGMFSR 117
           G Q+  G  AI  ++ +   +         D +    +P  +YT +L+D +  GFG+++ 
Sbjct: 65  GQQVTGGVAAIDASSNIKDVSGRSSGTNKGDMVPFTAVPFGFYTNKLNDQWAVGFGVYAP 124

Query: 118 VGLGTDYKDTDTWPGRYNCSYAAIHSVSLNPNLAMKLTDELSVAFGLDATYLRFMYDTTI 177
            GL TDY+    + G+   S + +  ++  P ++    D +S+ FG     +    ++ I
Sbjct: 125 FGLVTDYESG--FQGKAFGSKSEVTVITFQPTVSYAFNDRVSIGFGPTINRIAGTLESDI 182

Query: 178 S-PVDVMQ----QIDADGWAYGLNLGARYKPYDWLAFGVAWRSEMQLTVNGNVDFTQKGA 232
           + PV        +I  D  A G N G   +  D    G+ + S+++  + G+ + T+   
Sbjct: 183 NLPVAGTGSNNIKIKGDDTAVGFNAGLLVQATDTTRVGLTYHSKVKYKLEGHTEVTKGTN 242

Query: 233 VPAPAARDVRGTEPI----PESITFGVMVKPFDKLSLEVDAVWTRWSAYNTLVINYD--- 285
           VPA    + R    +    PES    V     D   L   A WTRWS    + +N +   
Sbjct: 243 VPASLLNNGRYDASLKIDTPESWDLSVTQDMSDAWKLYAGATWTRWSRLKDITVNNEGVS 302

Query: 286 ---------PALYGKSSVSAEKNWKNTWRLQFGAEYALTDSIDLRAGYVYDQTPVDDAHE 336
                    P + G  ++  ++NW +TW    G  Y +T  + LR G  +DQ+P ++   
Sbjct: 303 AAAGSGVLAPQIVG--TIKEDQNWHDTWAYAVGTSYRVTKQVVLRTGLTFDQSPTNNTDR 360

Query: 337 DYAVPCSDRQIATTGIGWKINEAWVLDASYSYLWMTDREYEARSGGIYDS--TREDAHAH 394
              +P  DR I + G+G+ +     +D +YSYL   +    AR+  +  S   + +  A+
Sbjct: 361 SPRIPTGDRTIFSLGLGYDVMPNMTVDLAYSYL-KEEPVKVARANALGQSYNAKYENSAN 419

Query: 395 MAGLSLTYKF 404
             GL +TYKF
Sbjct: 420 GFGLGVTYKF 429