Pairwise Alignments

Query, 404 a.a., outer membrane transport protein, OmpP1/FadL/TodX family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 421 a.a., putative Long-chain fatty acid transporter from Pseudomonas putida KT2440

 Score =  161 bits (407), Expect = 4e-44
 Identities = 120/427 (28%), Positives = 195/427 (45%), Gaps = 33/427 (7%)

Query: 1   MRKVLLVLCLALCPLQAWAAGYGVYEWSARGNALGGAMVARDADPSSVAY-NPAAITDLE 59
           M K  L + +AL   Q +A+G+ + E S      G A  +  A+ +S  + NPA ++ L+
Sbjct: 5   MLKTSLGVAVALASSQLFASGFALNEQSISSMGTGFAGRSSSAEDASTVFGNPAGMSRLK 64

Query: 60  GAQIQMGATAIAPTAKMT---SNTPGKRDAEFSDSIWGLPTFYYTQQLSDNYWFGFGMFS 116
             Q  +G  A+     ++   SN  G+ D +    + G+P  YY + + D++  GFG++ 
Sbjct: 65  REQFTVGGAAVIAKTDISGPGSNLGGETDGDMVPVV-GVPMGYYVKPIDDHWSVGFGIYV 123

Query: 117 RVGLGTDYKDTDTWPGRYNCSYAAIHSVSLNPNLAMKLTDELSVAFGLDATYLRF-MYDT 175
             GL TDY   D    RY    + +  V+  P ++    D++S+ FG     +   +  +
Sbjct: 124 PFGLVTDYGSDDA--ARYWGKKSHVQVVTFQPTVSYAFNDKVSIGFGPTINRIEGELGSS 181

Query: 176 TISPV-----DVMQQIDADGWAYGLNLGARYKPYDWLAFGVAWRSEMQLTVNGNVDFTQK 230
            I+P      D   +I  D  A G N+G   +  D    G+ + S +   + G      K
Sbjct: 182 LINPFTPGRNDGEVKIKGDDTAVGYNIGILVQATDRTRVGLTYHSMVDYELEG------K 235

Query: 231 GAVPAPAARDVRGTE-------PIPESITFGVMVKPFDKLSLEVDAVWTRWSAYNTLVIN 283
             V  P      G +         PES+   V  +  D+ +L   + WTRWS    + + 
Sbjct: 236 TRVSTPLIGPFNGNKFDASLKIKTPESVDLSVTHELDDQWTLYAGSTWTRWSRLENITVQ 295

Query: 284 YD-PALYGKSS---VSAEKNWKNTWRLQFGAEYALTDSIDLRAGYVYDQTPVDDAHEDYA 339
            D PA    S+   ++ E+NW +TW    GA Y +     LR G+  DQ+P ++      
Sbjct: 296 NDVPAPLAGSAFQTITEEQNWHDTWAHAIGASYKVNKEWVLRTGFTVDQSPTNNHDRSPR 355

Query: 340 VPCSDRQIATTGIGWKINEAWVLDASYSYLWMTDREYEARSG--GIYDSTREDAHAHMAG 397
           +P  DR+I + G GW  N+   +D +YSYLW  D +    S   G Y +  E++ AH  G
Sbjct: 356 IPTGDRRIFSLGAGWSPNDDMTIDVAYSYLWEEDTKVNQVSATKGSYQAKYENS-AHGIG 414

Query: 398 LSLTYKF 404
            SLTY+F
Sbjct: 415 ASLTYRF 421