Pairwise Alignments

Query, 404 a.a., outer membrane transport protein, OmpP1/FadL/TodX family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 446 a.a., long-chain fatty acid outer membrane transporter from Escherichia coli BL21

 Score =  100 bits (249), Expect = 8e-26
 Identities = 94/416 (22%), Positives = 168/416 (40%), Gaps = 58/416 (13%)

Query: 3   KVLLVLCLALCPLQAWAAGYGVYEWSARGNALGGAMVARDA---DPSSVAYNPAAITDLE 59
           K  L + +AL   QAW+AG+ + E+S+ G  LG A     A   D  +V+ NPA IT  +
Sbjct: 9   KSALAVAVALISTQAWSAGFQLNEFSSSG--LGRAYSGEGAIADDAGNVSRNPALITMFD 66

Query: 60  GAQIQMGATAIAPTAKMTSNTPGKRDAE---FSDSIWGLPTFYYTQQLSDNYWFGFGMFS 116
                 GA  I P   ++  +P  R  +    + + W +P  ++   ++D + +G  + S
Sbjct: 67  RPTFSAGAVYIDPDVNISGTSPSGRSLKADNIAPTAW-VPNMHFVAPINDQFGWGASITS 125

Query: 117 RVGLGTDYKDTDTWPGRYNCSYAAIHSVSLNPNLAMKLTDELSVAFGLDATYLRFMYDTT 176
             GL T++   DT+ G        + +++LN + A +L +  S   G +A Y R   +  
Sbjct: 126 NYGLATEF--NDTYAGGSVGGTTDLETMNLNLSGAYRLNNAWSFGLGFNAVYARAKIERF 183

Query: 177 I-------------SPVDVMQQ-------------------IDADGWAYGLNLGARYKPY 204
                         SP    QQ                   ++ + W +G N G  Y+  
Sbjct: 184 AGDLGQLVAGQIMQSPAGQTQQGQALAATANGIDSNTKIAHLNGNQWGFGWNAGILYELD 243

Query: 205 DWLAFGVAWRSEMQLTVNGNVD------FTQKGAVPAP-----AARDVRGTEPIPESITF 253
               + + +RSE+++   GN        F   G +P P     A +    T  +PE    
Sbjct: 244 KNNRYALTYRSEVKIDFKGNYSSDLNRAFNNYG-LPIPTATGGATQSGYLTLNLPEMWEV 302

Query: 254 GVMVKPFDKLSLEVDAVWTRWSAYNTLVINYDPALYGKSSVSAEKNWKNTWRLQFGAEYA 313
               +   + ++     +T WS +  L      +  G +     + +K+ +R+  G  Y 
Sbjct: 303 SGYNRVDPQWAIHYSLAYTSWSQFQQLKAT---STSGDTLFQKHEGFKDAYRIALGTTYY 359

Query: 314 LTDSIDLRAGYVYDQTPVDDAHEDYAVPCSDRQIATTGIGWKINEAWVLDASYSYL 369
             D+   R G  +D +PV   +   ++P  DR   + G  +  N+   +D   SY+
Sbjct: 360 YDDNWTFRTGIAFDDSPVPAQNRSISIPDQDRFWLSAGTTYAFNKDASVDVGVSYM 415