Pairwise Alignments

Query, 253 a.a., ribonuclease III (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 226 a.a., RNase III from Escherichia coli BL21

 Score =  140 bits (354), Expect = 2e-38
 Identities = 82/225 (36%), Positives = 125/225 (55%), Gaps = 7/225 (3%)

Query: 29  VDELQKTIGHRFGDMELLLTAMTHSSWANEQAVPVEHNERLEFLGDAVLELCVSEELFRR 88
           ++ LQ+ +G+ F   ELL  A+TH S +++      HNERLEFLGD++L   ++  L+ R
Sbjct: 6   INRLQRKLGYTFNHQELLQQALTHRSASSK------HNERLEFLGDSILSYVIANALYHR 59

Query: 89  FPSAREGDLTRMRSRLVSKPSLEGVARELRLDMSLRLGKGEESQGGRERGSLLSDALEAM 148
           FP   EGD++RMR+ LV   +L  +ARE  L   LRLG GE   GG  R S+L+D +EA+
Sbjct: 60  FPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEAL 119

Query: 149 LGAVFLDAGYIAAKGVVMRILGPHFPEALVPVRTKDYKSQLQELTQKLFRDRPVYTLLGS 208
           +G VFLD+     + +++        E     + KD K++LQE  Q      P Y ++  
Sbjct: 120 IGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQV 179

Query: 209 SGPEHDKQFDVRVVLPD-GTVFEATGPSMKRAEQMAAARAVATLD 252
            G  HD++F +   +         TG S ++AEQ AA +A+  L+
Sbjct: 180 RGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLE 224