Pairwise Alignments

Query, 1164 a.a., DNA polymerase III, alpha subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1154 a.a., DNA polymerase III subunit alpha from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  775 bits (2002), Expect = 0.0
 Identities = 450/1052 (42%), Positives = 625/1052 (59%), Gaps = 38/1052 (3%)

Query: 4    FVHLHCHTEYSLLDGAIRLKDLGARAKDYGMTAAAITDHGNLFGAAYFYTTCKSFGIKPI 63
            FVHL   + YSLL+GAI+   +G  A D GM A  + D  NLFGA  F  T K  G++PI
Sbjct: 10   FVHLRVRSAYSLLEGAIKAAKVGKLAADSGMPAVGVADRANLFGALEFSQTAKDAGVQPI 69

Query: 64   IGCEVYVAATDRTDKTSEFARTRYHLVLLAQNNEGYHNLVRLVTRGFTE-GFHYKPRVDK 122
            + C + V         + +A+    +VLLAQ+  G+ NL  L +  + + G   +P V  
Sbjct: 70   VACALPVFGIGG-QINARWAKVPT-VVLLAQDTAGWLNLCALSSSAYLDAGEMAEPGVAW 127

Query: 123  ELLREYSDGLIALSACLAGEVPRVLMKQGMDAGIATAQEYASIFPGRFYLELQSNGIKEQ 182
            E +   S+GLI LS    G V  +  +     G A      + F  RFY+ELQ +G++++
Sbjct: 128  EQVVARSEGLILLSGGPDGPVDPLFAQGKKAEGAAALAAMRAAFGDRFYVELQRHGLEDE 187

Query: 183  EVLNEKLIELAGHTNLPLVATNDCHYLDATDVEAHDILLCIQTQTTVDDPKRMRFETREL 242
            +     L+E A   ++PLVATND +Y  A   ++HD LLCI          R R  T E 
Sbjct: 188  KRAEPGLVEWAYANDVPLVATNDVYYAKAGQAKSHDALLCIADGAFTGQEDRRRI-TGEH 246

Query: 243  YYKSPEEMEKAFAHVPEAIANTGRIAEMCNIEMSFGKYFFPVYELPEGMTLDTEFQRLAE 302
            ++K    M + FA +PEA  NT  IA  C   ++      P ++   G +   E    A 
Sbjct: 247  WFKPAAVMREQFADLPEACDNTIDIARRCAFLVNTHAPILPRFDTGAGRSEADELAHQAR 306

Query: 303  EGLKKRLEKHPDRDTIDHKAYWDRLEWELKVITDMGFPGYFLIVQDFINWAKNNGIPVGP 362
            EGLK RL +      +  + YW RLEWE+ +I  MGFPGYFLIV DFI WAK +GIPVGP
Sbjct: 307  EGLKVRLTEVTP--AVPEEEYWTRLEWEVGIIQQMGFPGYFLIVSDFIKWAKTHGIPVGP 364

Query: 363  GRGSAAGSLVAWSLRITNLDPIPYDLLFERFLNNERVSMPDIDVDFCERRRTEVIRYVAE 422
            GRGS AGSLVAWSL IT+LDP+ + LLFERFLN ERVSMPD D+DFC+ RR EVI YV +
Sbjct: 365  GRGSGAGSLVAWSLTITDLDPLRFGLLFERFLNPERVSMPDFDIDFCQERREEVIDYVQD 424

Query: 423  KYGEDSVSQITTFGKMKAKAVVRDVGRALGMSFGETDRIAKLIPED--LKMTIKKALEAE 480
            +YG+D V+QI TFG ++A+AV+RDVGR L M  G+ DR+ K++P +    +T+ +A++ E
Sbjct: 425  RYGKDRVAQIITFGTLQARAVLRDVGRVLQMPLGQVDRLCKMVPNNPAAPVTLAQAIDIE 484

Query: 481  PDLATLYRDDPQIRKLLDVSMRLEGLSRHASTHAAGVVISDKPMSEYLPLYKGKKGE-TV 539
            P L      +P ++ LL+ ++ LEGL R+ASTHAAG+VI D+P++E +PLY+  +     
Sbjct: 485  PRLKEARDAEPAVKTLLETALELEGLYRNASTHAAGIVIGDRPLTELVPLYQDPRSTIPA 544

Query: 540  TQFDMKMVEKVGLVKFDFLGLRTMTLVQDALDEITRQGKTPPDLDTLSLDDAETYELYSR 599
            +QF+MK VE  GLVKFDFLGL+T+T++  A   + R+G    D ++L LDDA TYEL + 
Sbjct: 545  SQFNMKWVEPAGLVKFDFLGLKTLTVLDRARGYLERRG-AAKDWNSLPLDDARTYELMAS 603

Query: 600  GDTDGVFQVESSGMRQYLRMLRPTCFDDIIAMLALYRPGPLGSGMVDEFIKRKHGEVPVT 659
            G T GVFQ+ES GMR  LR +R    ++I A+++LYRPGP+   M+D +I RK G   V 
Sbjct: 604  GQTVGVFQLESQGMRDTLRKMRCGSIEEITALISLYRPGPM--EMIDTYIDRKFGRAEVD 661

Query: 660  YPVPSLEACLQPTYGVIVYQEQVMQIAQIVGSYTLGGADLLRRAMGKKIAEAMAEERTKF 719
            Y  PSL+  L  TYGVI+YQEQVM+IAQ++  Y+LG ADLLRRAMGKK  E M  +R +F
Sbjct: 662  YLHPSLKEVLTETYGVIIYQEQVMKIAQVLAGYSLGEADLLRRAMGKKKKEEMDFQRLRF 721

Query: 720  VQGAQKNDIPKEKANEIFDLMEKFAEYGFNKSHSAAYALISYYTAFLKVHFPVEFMAALL 779
            V+GA +  +P+ ++  IFDL+ KFA YGFNKSH+AAYALIS+ T +LK + PVEF AA +
Sbjct: 722  VKGAAEKAVPEAQSGSIFDLVAKFAGYGFNKSHAAAYALISFQTGWLKANQPVEFFAASM 781

Query: 780  TSEMGNQDKLLKYVAACKDMDIEVLRPNVQVSRREFTV----HEGRIVFGLGGIKNVGDE 835
            + ++ N DKL  +    K  D+ VL P++  S  +F V     +G +++ LG I+NVG E
Sbjct: 782  SLDLSNTDKLAVFYQDAKRFDVPVLAPDINRSSADFDVAWDDDKGAVLYALGAIRNVGLE 841

Query: 836  AIREIVDAREEGGPYASLLDMCVRVNLRKVTKRVIENLIKGGACDCLGCTRAGMLASLDT 895
            A++ +++ RE GG +A + D   RV+ R V KR +E L K GA D +   R  +L   D 
Sbjct: 842  AMKHVIEVRETGGRFADIFDFLERVDPRSVNKRALEGLAKAGAFDSIHTNRRQLLEQADV 901

Query: 896  VVARAQKKLKERDSNQVSLFTMIKEEPKVCPGIGFDCEEQTAPE------WPDDQKLRFE 949
            ++A  Q    ER S+QVSLF             G D      P       W   ++L  E
Sbjct: 902  LMAYCQSVAAERASSQVSLF-------------GGDQAHAARPRLKSVEPWVGPERLDHE 948

Query: 950  KEALGFFLTSHPLQPYRKELFRLRLTPLEEARDMPPGAE--IRTAVLVTTLKE-LMTKKG 1006
              A+GF+L+ HPL      L R R+T + EA  +        + A +V   +E    + G
Sbjct: 949  LSAVGFYLSGHPLDEMTSALKRKRVTFVAEAIPLAESGHEAFQMAGVVRRKQERASARTG 1008

Query: 1007 QRMAFAGVEDLTASAEVVFFPEPFAEARELLK 1038
            ++ AF    D T   E +F PE   + RE+L+
Sbjct: 1009 EKFAFVTFSDPTGEFECLFPPEQLRKCREVLE 1040