Pairwise Alignments

Query, 212 a.a., ribosomal protein S3 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 237 a.a., 30S ribosomal subunit protein S3 from Pseudomonas putida KT2440

 Score =  231 bits (589), Expect = 8e-66
 Identities = 117/208 (56%), Positives = 150/208 (72%), Gaps = 1/208 (0%)

Query: 1   MGQKVHPFGFRLGYNKNWQSRWYSK-KEYPAFVFEDHNIRKFVKKTLYHAGLAKIEIERA 59
           MGQKVHP G RLG  K   S WY+    Y  ++ +D   R++++  L  A +++I+I R 
Sbjct: 10  MGQKVHPTGIRLGIVKEHTSVWYADGATYADYLLKDLKTREYLQDKLKSASVSRIDIHRP 69

Query: 60  GGKVRLILSTARPGIVIGRKGVEIEKLRADLRKKFKREFAIEVNEIRRPEVESQLVAENI 119
               R+ + TARPGIVIG+KG ++EKLR DL K+      I + EIR+PE+++ LVA+++
Sbjct: 70  AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSV 129

Query: 120 ALQLERRVAFRRAMKRTVSMARKFGAEGIKVTCSGRLAGAEIARTEWYRDGRVPLQTLRA 179
           A QLERRV FRRAMKR V  A + GA+GIK+  SGRL GAEIARTEWYR+GRVPL TLRA
Sbjct: 130 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 189

Query: 180 DIDFGFAEARTTYGVIGVKVWIFKGELL 207
           DID+   EA TTYGVIGVKVWIFKGE++
Sbjct: 190 DIDYNTYEAHTTYGVIGVKVWIFKGEVI 217