Pairwise Alignments

Query, 524 a.a., bacterial type II/III secretion system protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 694 a.a., Type IV pilus biogenesis protein PilQ from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  167 bits (423), Expect = 1e-45
 Identities = 119/458 (25%), Positives = 207/458 (45%), Gaps = 25/458 (5%)

Query: 64  LRQEEVTAKQEEQKRPLPQMPVTLKLHNVDVGVALRSLAAAANTSIIVSPGVKGTASINV 123
           +R++++ + +  Q        ++L   N++V   L+ +A   N +I+ S  V G  ++ +
Sbjct: 250 VREQKIDSTKLTQGPGYSGEKLSLNFQNIEVRSLLQVIADFTNFNIVTSDSVTGAVTLRL 309

Query: 124 NRVPWEDVFKGILASNALDFAWRGELIQVMTLADKKAEVERELLETQRMAQQLKGRKVGP 183
             VPW+     IL +  L     G ++ +    D+ A  E++ LE++   + L+      
Sbjct: 310 KDVPWDQALDIILQAKGLGMRKSGNVLWIAP-KDEIAAREKQELESKVSIESLE-----T 363

Query: 184 LVTSVIEVRYAEAAELKKNLEGFLSKDEQNKPV------GAVVVDTHTNSLIVQAVEDDL 237
           L T   ++ YA+AA++   L    S    +         G+V+ +  TN L V  +   L
Sbjct: 364 LRTQGFQMNYAKAADIATQLTSTGSGGSGSTSARILSDRGSVISEPRTNQLFVTDIASRL 423

Query: 238 SKIITLVNNLDKPRAQILLKAHIVEATRDTARDLGIQWGGVGRSGNMGDGNRMWVTPGGS 297
            ++  L+  LD P  Q++++A IVEA     + LG++ GG  R  N G  N         
Sbjct: 424 EQVQELIRKLDIPIRQVMIEARIVEADDTFGKSLGVRLGGGVRGFNAGSANG-------- 475

Query: 298 GPTKPTDPQAGGGVPVIPPGGLSGQGFGMNFPVNKAGKTAMGSLGLMFGTIGGNMLEVQL 357
               P     G        G        +N P N +   A      +F       L +++
Sbjct: 476 ---NPIQGNFGSNYGAATTGPTLTSAPFVNLPANPSTAQAASFALSLFNPSASRFLSLEI 532

Query: 358 SALQDNGKLNILSSPSISTLDNQMAFTENGEKVPYVSTNAQGDREVKFEDAVLRLEITPH 417
           SAL+ +GK  I+SSP + T D   A  E G + PY +  + G   + F  A L+LE+TP 
Sbjct: 533 SALESDGKGRIVSSPRVVTADQVKALIEQGTEFPYQTATSSGATAIAFRKANLKLEVTPQ 592

Query: 418 VIDESNLKLKVQVKKDEVDLTRTVEGNPFIIKKQTETTLIVQDGETVVISGLTKERSSTR 477
           +  E N+ L + + KD      +      I  K  +T ++V++G TVVI G+ ++     
Sbjct: 593 ITPEGNIILDLDINKD--SRGESTPDGIAINTKHVQTQVLVENGGTVVIGGIFEQTERDE 650

Query: 478 RQGLPYLQDVEGIGALFGNDSKANKLEDVLIFITPAIL 515
              +P L D+  +G LF + ++     ++LIFITP +L
Sbjct: 651 VNKVPLLGDLPAVGNLFKSRNRIANKSELLIFITPRVL 688