Pairwise Alignments

Query, 524 a.a., bacterial type II/III secretion system protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 389 a.a., Type IV pilus biogenesis protein PilQ from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  173 bits (439), Expect = 9e-48
 Identities = 123/436 (28%), Positives = 216/436 (49%), Gaps = 55/436 (12%)

Query: 85  VTLKLHNVDVGVALRSLAAAANTSIIVSPGVKGTASINVNRVPWEDVFKGILASNALDFA 144
           VTL + +V V   L++LA     +++VSP V GT S+++  VPW+   + ++ S  L   
Sbjct: 1   VTLVVDDVPVVQVLQTLAEQERQNLVVSPDVSGTLSLHLTDVPWKQALQTVVNSAGLVLR 60

Query: 145 WRGELIQVMTLADKKAEVERELLETQRMAQQLKGRKVGPLVTSVIEVRYAEAAELKKNLE 204
             G ++ V + A +K    R+  E  R    L      PL    I ++YA+A EL K  E
Sbjct: 61  QEGNILHVHSQAWQKEHSARQDAERLRFQANL------PLENRSISLQYADAGELAKAGE 114

Query: 205 GFLSKDEQNKPVGAVVVDTHTNSLIVQAVEDDLSKIITLVNNLDKPRAQILLKAHIVEAT 264
             LS        G ++VD  TN L+++     L+++   V+ +D P AQ+ L AHIV   
Sbjct: 115 KLLSAK------GTIMVDKRTNRLLLRDNRAALAELEKWVSQMDLPVAQVELAAHIVTIN 168

Query: 265 RDTARDLGIQW--GGVGRSGNMGDGNRMWVTPGGSGPTKPTDPQAGGGVPVIPPGGLSGQ 322
             + R+LG++W      ++G++GD     VT   S                         
Sbjct: 169 EKSLRELGVKWTLADATQAGSVGD-----VTTLSS------------------------- 198

Query: 323 GFGMNFPVNKAGKTAMGSLGLMFGTIGGNMLEVQLSALQDNGKLNILSSPSISTLDNQMA 382
                   + +   A   +G   G I G +L+++LSAL+    L+I++SP +     Q A
Sbjct: 199 --------DLSVAAATSRVGFNIGRINGRLLDLELSALEQKQLLDIIASPRLLASHLQPA 250

Query: 383 FTENGEKVPY-VSTNAQGDREVKFEDAVLRLEITPHVIDESNLKLKVQVKKDEV-DLTRT 440
             + G ++PY VS+   G   V+F++AVL +E+TP V+ +  ++LK+ + ++    + + 
Sbjct: 251 SIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLKLHISQNVPGQVLQQ 310

Query: 441 VEGNPFIIKKQT-ETTLIVQDGETVVISGLTKERSSTRRQGLPYLQDVEGIGALFGNDSK 499
            +G    I KQ  ET + V+ GET+ + G+   ++ +    +P L D+  +G LF +D K
Sbjct: 311 ADGEVLAIDKQEIETQVEVKSGETLALGGIFSRKNKSGSDSVPLLGDIPWLGQLFRHDGK 370

Query: 500 ANKLEDVLIFITPAIL 515
            ++  ++++FITP ++
Sbjct: 371 EDERRELVVFITPRLV 386