Pairwise Alignments

Query, 573 a.a., general secretion pathway protein E, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 570 a.a., type IV-A pilus assembly ATPase PilB from Kangiella aquimarina DSM 16071

 Score =  353 bits (907), Expect = e-102
 Identities = 223/568 (39%), Positives = 326/568 (57%), Gaps = 25/568 (4%)

Query: 7   LGELLVEAGIISDEQLKVALRDHKKSGLRLGQFLIKTGVCREGDVVATVSRQLRIDRYSP 66
           L  LLV  G++S E+++ A+++ K+  L L  +L+  G   EG   A          +  
Sbjct: 11  LAHLLVAEGLLSKEKVQQAVKNAKEEKLGLIDWLVTAGWL-EGKQAAKAQAL----NFGY 65

Query: 67  QDFPLSLNMAERLP-----LETAQKCNAVPLQQHGHVLVVAMTDPLDIDACDTIEFATNS 121
             F LS    E +P     L+  Q   AVPL + G  L VA++D  +I + + I F T  
Sbjct: 66  PYFDLSSIAFENIPKDVIDLKLMQAHRAVPLYKRGTRLFVAVSDATNIKSLEEIRFQTGC 125

Query: 122 EVEPVICTEQEFNQLFSAVYGMFTNLDGVIESLGDLHTATAAKTETE----DRDVALEEL 177
            VE V+    E N+L + V  +    +   E+L D   A     + +    D +  ++E 
Sbjct: 126 SVEAVLV---EPNKLEAVVSKLIEEKEN--ETLSDFDDADLDNIDLDAVDPDAEQDMDEG 180

Query: 178 ASQADLAPVVRLVNSILAQAVREGASDVHISPEKDSRQVRFRIDGKLREAPAPPKNVAPA 237
           A   D APVV+ V  +L  A+R+GASD+H  P +   +VRFRIDG L E  +PP  +A  
Sbjct: 181 AGGED-APVVKFVKQMLVSAIRKGASDLHFEPYEKKYRVRFRIDGMLHEVASPPVQLAGR 239

Query: 238 MVSRLKILGNMDIAVTRVPQDGRFTMNLDN-REINVRVSSIPTIYGENMVLRLLDMSGRD 296
           + +RLK+L  +DI+  RVPQDGR  + +   + I+ RV+++PT++GE +V+R+LD S   
Sbjct: 240 ISARLKVLSGLDISERRVPQDGRVKLKISKTKAIDFRVNTLPTLFGEKIVMRILDPSQAM 299

Query: 297 YTLDQLGMEQTDHTVIKRVIHKPYGMILSTGPTGSGKSTSLYAILKSINTPEINIITLED 356
             +D LG +        R I KP GM+L TGPTGSGK+ +LY  +  +N    NI T ED
Sbjct: 300 LGIDALGFDPKQKKDFMRAIEKPQGMVLVTGPTGSGKTVTLYTGVNILNDEYKNISTAED 359

Query: 357 PVEYRIGGIRQVQLNRKAGMTFASGLRSILRQDPDVVMVGEIRDAETASIAVQAALTGHL 416
           PVE  + GI QV +N KAG+TFAS LR+ LRQDPD+V+VGEIRD ETA IA++AA TGHL
Sbjct: 360 PVEINLHGINQVNVNVKAGLTFASALRAFLRQDPDIVLVGEIRDLETAEIAIKAAQTGHL 419

Query: 417 VLSTLHTNDAAGAVTRLIDMGIEPFLVSSVMLASFAQRLVRRVCPNCAEPYDPPHAALAA 476
           VLSTLHTN A   +TRL++MG+ PF +++ +    AQRL RR+C +C +P D P  AL  
Sbjct: 420 VLSTLHTNSAPETLTRLVNMGVAPFNIATTVNLVVAQRLARRLCEHCKKPSDLPKEALLE 479

Query: 477 FGIDPAEGHDGRSRFLKGRGCFHCAHTGYRGRTGLFEILPMVPEIQELVVRRSSTQVIAN 536
            G    E ++      +  GC  C   GY+GR GLF+++P+  E   +++   +   IA+
Sbjct: 480 EGFSEEELNE--LTIYEPVGCDKCT-MGYKGRVGLFQVMPVSEENGRIIMEGGNAIDIAD 536

Query: 537 TAIEAGLMRTLVQDAALKVRAGITTVEE 564
            A + G+   L +    KV+AG+T++ E
Sbjct: 537 QAKKEGI-PDLRRAGLNKVKAGLTSLAE 563