Pairwise Alignments

Query, 573 a.a., general secretion pathway protein E, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 497 a.a., putative type II secretion protein GspE from Escherichia coli BL21

 Score =  362 bits (928), Expect = e-104
 Identities = 206/478 (43%), Positives = 292/478 (61%), Gaps = 21/478 (4%)

Query: 99  LVVAMTDPLDIDACDTIEFATNSEVEPVICTEQEFNQLFSAVYGMFTN-LDGVIESLG-- 155
           L +    PL +     ++   N+        E EF Q  +AV+   ++    ++E LG  
Sbjct: 33  LEILHVHPLSLSVLQELQRGLNAPFTLRQIDEAEFEQRLNAVWQRDSSEARQLMEDLGSA 92

Query: 156 -DLHTATAAKTETEDRDVALEELASQADLAPVVRLVNSILAQAVREGASDVHISPEKDSR 214
            D  T      ETED       L    D AP+++L+N++LA+A++EGASD+HI   + S 
Sbjct: 93  EDFFTLAEELPETED-------LLESDDDAPIIKLINAMLAEAIKEGASDIHIETFEKSL 145

Query: 215 QVRFRIDGKLREAPAPPKNVAPAMVSRLKILGNMDIAVTRVPQDGRFTMNLDNREINVRV 274
            +RFR+DG L E   P + +A  +VSR+K++  +DIA  RVPQDGR  + L  R I+VRV
Sbjct: 146 VIRFRVDGTLHEMLRPGRKLASLLVSRIKVMARLDIAEKRVPQDGRIALLLGGRAIDVRV 205

Query: 275 SSIPTIYGENMVLRLLDMSGRDYTLDQLGMEQTDHTVIKRVIHKPYGMILSTGPTGSGKS 334
           S++P+ +GE +VLRLLD +    TL++LG+       +++++HKP+G+ L TGPTGSGKS
Sbjct: 206 STMPSAWGERVVLRLLDKNQARLTLERLGLSHELTAQLRQLLHKPHGIFLVTGPTGSGKS 265

Query: 335 TSLYAILKSINTPEINIITLEDPVEYRIGGIRQVQLNRKAGMTFASGLRSILRQDPDVVM 394
           T+LYA L+ +N    NI+T+EDP+EY I GI Q Q+N + GMTFA GLR+ILRQDPDVVM
Sbjct: 266 TTLYAGLQELNNHSRNILTVEDPIEYMIEGIGQTQVNTRVGMTFARGLRAILRQDPDVVM 325

Query: 395 VGEIRDAETASIAVQAALTGHLVLSTLHTNDAAGAVTRLIDMGIEPFLVSSVMLASFAQR 454
           VGEIRD ETA IAVQA+LTGHLVLSTLHTN A GA+TRL DMG+EPFL+SS +    AQR
Sbjct: 326 VGEIRDTETAEIAVQASLTGHLVLSTLHTNTAVGAITRLQDMGVEPFLLSSSLTGVMAQR 385

Query: 455 LVRRVCPNCAEPYDPPHAALAAFGIDPAEGHDGRSRFLKGRGCFHCAHTGYRGRTGLFEI 514
           LVR +CP+C +            GI  A            +GC  C H G+RGRT + E+
Sbjct: 386 LVRTLCPDCRQALPATDEEKRLLGITDAR----TVTLYHPQGCPACNHKGFRGRTAIHEL 441

Query: 515 LPMVPEIQELVVRRSSTQVIANTAIE--AGLMRTLVQDAALKVRAGITTVEEAATAVM 570
           + +   +++L+ R++    +     +  AG+    ++    KV AG T+++E     M
Sbjct: 442 IVVDATLRDLIHRQAGELELERYVRQHSAGIRSNGIE----KVLAGETSLDEVLRVTM 495