Pairwise Alignments

Query, 408 a.a., general secretion pathway protein F, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 405 a.a., type II secretion system inner membrane protein GspF from Paraburkholderia sabiae LMG 24235

 Score =  186 bits (473), Expect = 8e-52
 Identities = 119/408 (29%), Positives = 211/408 (51%), Gaps = 9/408 (2%)

Query: 1   MASFSYTARNENGVKMEGVIDAESTEAARAILFSRGYVPLEVKAGAGGGFSLGLGALADA 60
           M +F + A +  G   +GV+DA+S   AR  L ++G  PL V+  A    +   G  +  
Sbjct: 1   MPAFRFEAIDAAGKAQKGVLDADSARGARTQLRTQGLTPLVVEPAA----TRTRGERSQR 56

Query: 61  LS---PIPPKELILFTKQFRTLFQAGIPITQLLQVLQNQTEHKRLKAIAAEMSQAIMGGA 117
           LS    +  +E  + T+Q  +L  AG+P+ + L VL  Q+E   ++ + A +   ++GG 
Sbjct: 57  LSLGRKLSQREQAILTRQLASLLIAGLPLDEALSVLTEQSERDYIRELMAAIRAEVLGGH 116

Query: 118 TLYDAFRAHPKVFSELYCSMMRAGEASGALGEVMDRLVYLLEHEHKIRSDIKSALRYPKM 177
           +L +A   HPK F ++Y +++ AGE +G LG V+ RL   +E  + ++  I  A  YP +
Sbjct: 117 SLANALSQHPKDFPDIYRALVAAGEHTGKLGLVLSRLADYIEQRNALKQKIVLAFTYPTI 176

Query: 178 V-MGALAVAFFVLLNLVIPKFVLIFSQARITLPWPTKIAIGMHYVFSTYWYVVLAVVVAG 236
           V + A  +  F LL+ V+P+ V +F+  +  LP+ T + + +     +YW+ +L  VV  
Sbjct: 177 VTIIAFGIVTF-LLSYVVPQVVNVFASTKQQLPFLTIMMMALSGFVRSYWWAMLIAVVIV 235

Query: 237 TVAYKYWVRTEDGRYWRDRLVLRLPGVGPVIQKSVMARFASIFAILQSSGVSVLDALDVL 296
            +  +  +     R   DR  L  P VG +++     RFAS   IL ++GV +L AL   
Sbjct: 236 VLVVRSILSQPGPRLAFDRWTLTAPLVGKLVRGYNTVRFASTLGILTAAGVPILRALQAA 295

Query: 297 NNTIGNAAIAREFTRIQDQLREGRGIAEPLRTARFFTPLVVNMVAIGEESGSLDAMLNDV 356
           + T+ N A+         ++REG  ++  L   + F P++V+++  GE +G + +ML+  
Sbjct: 296 SETLSNRAMRGNIDDAIVRVREGTSLSRALGNTKTFPPVLVHLIRSGEATGDVTSMLDRA 355

Query: 357 ARHYDEEVEYAVAGMAEAIGPVLIVALAAVVGFFALAIFMPMWDLTQM 404
           A     E+E     +   + P+LI+A+  VV    LA+ +P+ +L  +
Sbjct: 356 AEGEASELERRTMFLTSLLEPLLILAMGGVVLVIVLAVMLPIIELNNL 403