Pairwise Alignments

Query, 377 a.a., riboflavin biosynthesis protein RibD (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 358 a.a., bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD from Magnetospirillum magneticum AMB-1

 Score =  218 bits (554), Expect = 3e-61
 Identities = 138/329 (41%), Positives = 178/329 (54%), Gaps = 14/329 (4%)

Query: 9   MREAIALAERGRWYAAPNPTVGAVLVRDGEVAARGWHTGYGKPHAEVECLRDAASKGVDP 68
           MR A+ALA RG     PNP VG V+V+DG V  RGW    G+PHAE E L  A S  +  
Sbjct: 1   MRAALALARRGLGTVWPNPAVGCVIVKDGRVVGRGWTQPGGRPHAETEALAMAGSAALG- 59

Query: 69  AHCTLVVTLEPCNHHGKTPPCSHAIVEAGITRVVVGLADPNP-VASGGAEYLRAHGVTVD 127
              T+ VTLEPC HHGKT PC+ A+V AG++RVVV + DP+  VA  G + LR  G+ V 
Sbjct: 60  --ATVYVTLEPCAHHGKTAPCADALVAAGVSRVVVAVQDPDSRVAGKGVDRLRVAGIPVT 117

Query: 128 MGVCEQECHDLVADFLTWKLTDLPYVILKLASTLDGRIATRSGHSQWISGAEARAAVHEL 187
            GV   E  +L A F     T  P V LKLA+TLDGRIAT +G S+WI+G +AR+A H L
Sbjct: 118 EGVLHAEAAELNAGFFLRINTGRPLVTLKLATTLDGRIATHTGESRWITGDQARSAAHLL 177

Query: 188 RARIGEAGGAVLVGGTTLYTDDPQLTARVAPLPRRQPMAVV--ATRHVPHHDALPRIFRE 245
           RA       A++VG  T   DDP LT R+  L  R P+ VV      +P    L     +
Sbjct: 178 RAET----DAIMVGSGTALHDDPDLTCRLPGLVERSPVRVVVDGRLRLPLTSRLVATAND 233

Query: 246 RPGQCVVWTDSTGAGTEAADALRTSGVCIMALPLTPSGRLDLRAGLTRLRADHGVEHVLC 305
            P   +   D         +A   +GV ++ +     G +DL   L  L  + GV  VL 
Sbjct: 234 VPTWLLTLED---CDVNRREAYEDAGVDVVEVSPGADGAIDLELALQAL-GESGVTRVLV 289

Query: 306 EGGGKLALSLLEAGLVGEFHLHMAPKIIG 334
           EGG  L+ +LL AGLV       AP+++G
Sbjct: 290 EGGAHLSAALLRAGLVDRMVWFRAPRLMG 318