Pairwise Alignments

Query, 377 a.a., riboflavin biosynthesis protein RibD (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 414 a.a., bifunctional riboflavin deaminase-reductase from Agrobacterium fabrum C58

 Score =  176 bits (447), Expect = 8e-49
 Identities = 135/380 (35%), Positives = 179/380 (47%), Gaps = 55/380 (14%)

Query: 4   DFTPFMREAIALAERGRWYAAPNPTVGAVLVRDGEVAARGWHTGYGKPHAEVECLRDAAS 63
           D   FM  AI ++ R +     NP+VG VLV+DG++ A       G+PHAE + L  A  
Sbjct: 6   DDEKFMARAIEVSLRHQGQTLTNPSVGCVLVKDGQIIAEAVTAIGGRPHAERQALEIA-- 63

Query: 64  KGVDPAHCTLVVTLEPCNHHGKTPPCSHAIVEAGITRVVVGLADPNPVASG-GAEYLRAH 122
            G      T  VTLEPC+H GKTPPC++A+VE G+ RVVV + DP+   SG G   LR  
Sbjct: 64  -GEAARGATAYVTLEPCSHWGKTPPCANALVEYGVARVVVAVDDPDERVSGRGYTILRDA 122

Query: 123 GVTVDMGVCEQECHDLVADFLTWKLTDLPYVILKLASTLDGRIATRSGHSQWISGAEARA 182
           G+ V+ G+   E    +A +LT ++   P+VILKLA + DG I         I+GAE+R 
Sbjct: 123 GIVVETGLLRDEGKRALAGYLTRQMKKRPHVILKLAVSADGMIGREGEGQVAITGAESRR 182

Query: 183 AVHELRARIGEAGGAVLVGGTTLYTDDPQLTARVAPLPRRQPMAVVATR--HVPHHDALP 240
            VHELRAR       +LVG  T   DDP+LT R+A + RR P+ +V  R   +P    L 
Sbjct: 183 VVHELRARC----DGILVGIRTAIADDPELTVRIAGMERRSPVRIVLDRQFELPLMSKLV 238

Query: 241 RIFRERPGQCVVWTDSTGAG-----------------------TEAADALRTSGVCIMAL 277
           R  RE P        S   G                       + A D  + S   I  L
Sbjct: 239 RSAREVPVIVAALPPSALPGISPSRGEIGEALSARSNFEPVSHSPAVDVGQDSAPSIPPL 298

Query: 278 P------------------LTPSGRLDLRA----GLTRLRADHGVEHVLCEGGGKLALSL 315
                              LT +G   L A     L  + A+ G+  +L EGG   A S 
Sbjct: 299 EGEMPGRAEGGNPNLRRQLLTDAGVQILEASTLENLLHILAESGISELLVEGGAFAAKSF 358

Query: 316 LEAGLVGEFHLHMAPKIIGD 335
           LEAGLV    L  +P +IG+
Sbjct: 359 LEAGLVDRIMLFESPVVIGE 378