Pairwise Alignments

Query, 368 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 362 a.a., Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain from Kangiella aquimarina DSM 16071

 Score =  159 bits (401), Expect = 1e-43
 Identities = 121/364 (33%), Positives = 186/364 (51%), Gaps = 53/364 (14%)

Query: 8   AVALLSGGLDSILAVKLVEEQGLRVKCLHFVSPFF--GKPSQVRR------------W-R 52
           AVAL+SGGLDS+LA K+++EQG+ V+ ++F + F   G    +R+            W  
Sbjct: 20  AVALISGGLDSLLAAKVIQEQGVHVEGINFYTGFCVEGHTHAIRKKDKDKQKRNNALWVA 79

Query: 53  SIYALDITTVDVSDDFARMLAERPQHGFGKVMNPCVDCKILMLRRARELM--TQYGATFI 110
               + +  +D+S+++  ++   P+HG+G  +NPC+DCKI M+ +A+      + G  FI
Sbjct: 80  EQLGIKLHIIDISEEYKDIVLN-PKHGYGANLNPCLDCKIFMVNQAQAWAWAEENGFDFI 138

Query: 111 ITGEVLGQRPMSQRRDTLNVIRRDAEVRDLLLRPLSAKLLDPTPFELSGMVDRERLLAIS 170
           ITGEV+GQRP SQR++T+ +I R++   D LLRPL AK L PT  E  G VDR++L   S
Sbjct: 139 ITGEVIGQRPKSQRKETMPIIARESGAEDRLLRPLCAKNLMPTLPEREGWVDRDQLYDFS 198

Query: 171 GRGRKEQMALAERFALEEIPTPAGGC----------KLA---ERENARRYWPVLVHAPTV 217
           GR RK Q  LA++F  ++   PAGGC          KLA   E    RRY          
Sbjct: 199 GRSRKPQFELAKKFGFDDFAQPAGGCCFLTDANYSAKLADLWEARGERRY---------- 248

Query: 218 TAAEFRLSNIGRQYWQGAHW-LSIGRHQKDNEALERFAFPGDLRFKVVGYPGPLAVGRQF 276
              +  L  +GR      ++ L + R + +N  L+ +          V + GPL +    
Sbjct: 249 ELDDIMLLKVGRHIRPKPNFKLIVSREEGENNFLKGYK-KQFTSIHTVSHGGPLTL---L 304

Query: 277 NGQPWSEEVVCDAASFVASFSPKAVRDGIAVAVRVTCGET-VREVQVMPARATVLGWAED 335
           +G  + ++ +  AA  VA +S     D + V +    G + V +V  MPA        ++
Sbjct: 305 DG-AFDKDDIKLAAQIVARYSGGKSADAVTVQIENYNGTSYVMDVPPMPAHE-----VKE 358

Query: 336 EWPV 339
           EW V
Sbjct: 359 EWHV 362