Pairwise Alignments

Query, 879 a.a., alanyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 874 a.a., alanine--tRNA ligase from Pseudomonas sp. S08-1

 Score =  801 bits (2070), Expect = 0.0
 Identities = 422/876 (48%), Positives = 577/876 (65%), Gaps = 26/876 (2%)

Query: 6   EIRRRFLEFYKAHGHEAVRSSSLVPKDDPSLLFTNAGMVQFKKIFLGQEKRAYSRATTSQ 65
           EIR  FL F++  GH  V SSSL+P +DP+LLFTNAGM QFK  FLG EKRAY+RATTSQ
Sbjct: 5   EIREAFLRFFEEKGHTRVASSSLIPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRATTSQ 64

Query: 66  KCLRVGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKEDAIKFAWKFLTEE--LKLPKE 123
           KC+R GGKHNDLENVG TARHHTFFEMLGNFSFGDYFK DAI +AW+FLT    L LPKE
Sbjct: 65  KCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIAYAWEFLTSNKWLNLPKE 124

Query: 124 RLYATVFRDDDEAEQLWLKHSDIPAERIYRMGE-------KDNFWSMGDTGPCGPCSEIL 176
           +L+ TV+  DDEA  +W K   IPAER+ R+G+        DNFW+MGDTGPCGPC+EI 
Sbjct: 125 KLWVTVYATDDEAYDIWHKEVGIPAERMIRIGDNKGAPYASDNFWAMGDTGPCGPCTEIF 184

Query: 177 IDQGEHMTCGPDCGIGKCDCDRFLEIWNLVFMQYDQDATGKREPLPKPSIDTGMGLERIT 236
            D GEH+  GP  G  + D DR++EIWN VFMQ+++ A G   PLP PS+DTGMGLERI+
Sbjct: 185 FDHGEHIWGGPP-GSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERIS 243

Query: 237 AVCQGVFSNFDTDIFQAIIQYTCGLANVSYRSDDETDTALRVIADHSRAIAFMITDGILP 296
           AV Q V SN++ D+FQ+++    G A  +    +E   +L+V+ADH R+  F+I DG+ P
Sbjct: 244 AVLQHVNSNYEIDLFQSLL----GAAAKAIGCANEGQASLKVVADHIRSCGFLIADGVTP 299

Query: 297 SNEGRGYVLRRLIRRAYRFGRLIGLTDTFLHKTALKVVDIMGDDYPELRENSDFMARVVR 356
           SNEGRGYVLRR+IRRA R G  +G   +F ++    +V  MG+ +PEL++    + RV++
Sbjct: 300 SNEGRGYVLRRIIRRACRHGNKLGAKGSFFYQIVGALVAEMGEAFPELKQQQSHIERVLK 359

Query: 357 EEEDRFNRTLDKGLSMLEDELATLSASGAAHVPGDIAFRLYDTFGFPLDIVNDIAEKRGF 416
            EE++F +TL++GL +LE +LA L  S    +PGD+ F+LYDT+GFP+D+  DIA +R  
Sbjct: 360 TEEEQFAKTLEQGLKILEQDLADLKGS---VIPGDVVFKLYDTYGFPVDLTGDIAREREL 416

Query: 417 SVDEDGFKALMKEQKERAKAAWKGSGEKDIASRFQPLLEEGMRSEFIGYDHLCGEGRIVA 476
           ++DE+GF+  M+ Q+ERA++A            +  L++    + F+GY    G G++VA
Sbjct: 417 TLDEEGFEREMEVQRERARSA------SSFGMDYNSLVKVDSDTVFLGYQGTAGNGKVVA 470

Query: 477 LMDEHALAVERLAAGQKGYLVTNRTPFYGASGGQSGDIGTIASPSGKVRVVDTIKPSPEL 536
           L    A AV+ L  G++G +V ++TPFY  SGGQ GD G +++   +  V DT K     
Sbjct: 471 LFKAGA-AVDSLGEGEEGVIVLDQTPFYAESGGQVGDSGYLSAAGVRFDVRDTTKAGGAF 529

Query: 537 VVHHVEAVEGDILLDQEVDLTVTEDDRVASARNHTCTHLLHAALRRVLGDHVKQAGSLVA 596
            +HH    +G + +   V   V    R A+A NH+ THLLHAALR+VLG+HV+Q GSLV 
Sbjct: 530 -LHHGVVAQGSLKVGAAVQAEVDASVRQATALNHSATHLLHAALRQVLGEHVQQKGSLVD 588

Query: 597 PDRLRFDFTHIAPMTPEELAAVEREVNRVIMADIPLETDHMHYDDAVKRGAMALFGEKYG 656
             RLRFDF+H   + PE+L  +E  VN  I  +  +ET+    + A  +GAMALFGEKYG
Sbjct: 589 SQRLRFDFSHFEAIKPEQLKQLEELVNAEIRKNSEVETEETDIETAKAKGAMALFGEKYG 648

Query: 657 DEVRVVAIADE-SVELCGGTHLRATGQAGLFLIVSESGVAAGVRRIEALTGWNAMHAVLA 715
           D+VRV+ +    SVELCGGTH+  TG  GLF I SE GVAAGVRRIE +TG  A+  +  
Sbjct: 649 DDVRVLTMGGGFSVELCGGTHVSRTGDIGLFKITSEGGVAAGVRRIEGVTGAAALAWLNG 708

Query: 716 QRSEQAQLSAMLKARPGEIVSRVESLQKENRTLRKDMERAAAQATSGQGRNIMDEATDVA 775
              +  + +A++K     ++ ++  L + NR L K++E+  A+A S  G ++   A DV 
Sbjct: 709 AEEQLKEAAALVKGSRDNVLDKLSGLIERNRQLEKELEQLKAKAASAAGNDLAGSAVDVK 768

Query: 776 GVKLLAAKVEVPNVKALRDLMDDVRSKLVSGIACLAAVDGDKVQLIIAVSKDLQTRFTAP 835
           G+K+LA++++  + KAL  ++D +++KL S +  L  V  DKV L+  V++DL  +  A 
Sbjct: 769 GIKVLASRLDGLDGKALLAMVDQLKNKLGSAVILLGGVQDDKVVLVAGVTQDLTAKLKAG 828

Query: 836 QLIKDVAAEVGGSGGGRPDMAQAGGTNPAGIDAAFA 871
            L++  AA VGG GGGRPDMAQ GG +   +D A A
Sbjct: 829 DLMRQAAAAVGGKGGGRPDMAQGGGVDAGKLDEALA 864