Pairwise Alignments

Query, 202 a.a., 3- 5 exonuclease domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 384 a.a., ribonuclease D from Kangiella aquimarina DSM 16071

 Score = 46.6 bits (109), Expect = 6e-10
 Identities = 44/169 (26%), Positives = 69/169 (40%), Gaps = 5/169 (2%)

Query: 30  VRLVRTEEELADALDVLRSDSVLGFDTETRPTFRKGKVNLPSLVQLACADVVYLIQLNWV 89
           V  V + E L +     R   VL  DTE   T      +  +L+Q+     +YLI     
Sbjct: 15  VETVLSTERLEELCQTWRKLDVLSVDTEFDRT--NTYFHRLALIQIYDGQEIYLIDPLAF 72

Query: 90  PLGEMLADLLSDPAIIKTGVAVRDDIRDLQKLYAFRDGGVVDLGEVAR--DLGLETHGLR 147
                L ++    +I+K   +  +D+  L   Y F    V D    A    +GL   G  
Sbjct: 73  EDISALEEIFKSTSIVKAFHSCSEDLEALYHQYGFEFNQVFDTQIAASIDGIGLSV-GYG 131

Query: 148 NLAANFLGIRISKGAQCSNWSNRELGPQQVVYAATDAWVSREIHISMRN 196
           N+  +FL I + K    ++W  R L  +Q VYAA D      ++  +R+
Sbjct: 132 NIVEHFLSIVLDKEHTKTDWLQRPLSQEQKVYAAQDVQYLLPVYYRLRD 180