Pairwise Alignments

Query, 457 a.a., tRNA modification GTPase TrmE (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 466 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Paraburkholderia sabiae LMG 24235

 Score =  230 bits (586), Expect = 8e-65
 Identities = 169/471 (35%), Positives = 246/471 (52%), Gaps = 29/471 (6%)

Query: 5   DTIAAIATPLGQGGIGIIRIS----GPASLE-VLRALFRPS-SSRFGGFRPWTLHHGTIT 58
           D I AIAT  G+GGIG++RIS    G A+ + +++AL   + + R   + P+      + 
Sbjct: 7   DPIVAIATAPGRGGIGVVRISFGRAGEAAAQPMMQALTGQALAPRHASYVPF------LD 60

Query: 59  DGCDPLDDVLAVHMPGPRTFTGEDVSEIHCHGGSGVLAAVLEACV----RHGARYAERGE 114
            G + LD  +A++ P P ++TGE V E+  HGG  VL  VL+ C+      G R AE GE
Sbjct: 61  SGGNALDRGIALYFPAPHSYTGEHVLELQGHGGPIVLQLVLQRCIDAGRAFGLRLAEPGE 120

Query: 115 FTRRAFLNGRMDLTQAEAVAEMIAAPSREGMRLAQAKLDGLLGQRVGALRARLDALRMQL 174
           FTRRAFLN ++DL QAEAVA++I A +    R A   LDG   + + AL   +  LRM +
Sbjct: 121 FTRRAFLNDKLDLAQAEAVADLIEASTEAAARSAGRSLDGAFSRDIHALVEDVITLRMLV 180

Query: 175 CVAVDFPEEEVECLAPEAFLAEIEAVRQGVVELSAGYARTRCWQDGALVVLAGQVNAGKS 234
              +DFPEEE++ L       ++  +R+ +  + +   +    ++G  VVLAGQ N GKS
Sbjct: 181 EATLDFPEEEIDFLEAADARGKLARIRERLALVLSEARQGALLREGLSVVLAGQPNVGKS 240

Query: 235 SLMNALLGRRRAIVTDLPGTTRDFIEEPLNLSGLAIRLADTAGLRETGDIVEQEGVRMSR 294
           SL+NAL G   AIVT + GTTRD + + + + G+ + + DTAGLRET D VE+ G+  + 
Sbjct: 241 SLLNALAGAELAIVTPIAGTTRDKVAQTIQVEGIPLHVIDTAGLRETEDEVEKIGIERTW 300

Query: 295 DLVAQADLVLLVTDATQGLQGPELELLRHAGPERVLV--VFNKTDLL-----EGRILPST 347
             + +AD+VL + DA  G+ G + E +    P  V V  V NKTDL        ++  S 
Sbjct: 301 GEIERADVVLHLLDARSGMTGDD-ETIAARFPRGVPVVRVINKTDLTGVAPDVAKLNGSG 359

Query: 348 PEGCRSVHVAAASGDGVESLVTAIRAAVLAATGAGEPEAGELAPNMRQAAALDKAATILD 407
                 V ++A  GDG    ++ +R  +L   G             R   AL  A   L 
Sbjct: 360 DADLSEVRLSAKMGDG----ISLLRGELLRIAGWQAGAESVYLARERHLIALRAAQNHLG 415

Query: 408 ELAGDI-RAHVPYDLCGVRLDGACAALMDVTGQSTPEAILDAIFASFCIGK 457
             A    +     DL    L  A   L  +TG+ T + +L  IF+ FCIGK
Sbjct: 416 LAAEHADQNSQALDLFAEELRLAQDQLNSITGEFTSDDLLGVIFSRFCIGK 466